Gene : Glyma.08G202100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10071:SF197 - GATA TRANSCRIPTION FACTOR 9 Genomic Order:  2021
Name:  ? Glyma.08G202100 Secondary Identifier:  ? PAC:30538812
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G202100 0.5kb upstream 0.5kb upstream 1675 true Chr08: 16391590-16393264 Glycine max
Glyma.08G202100 0.5kb upstream 0.5kb upstream 500 false Chr08: 16391590-16392089 Glycine max
Glyma.08G202100 0.5kb downstream 0.5kb downstream 1675 true Chr08: 16392090-16393764 Glycine max
Glyma.08G202100 0.5kb downstream 0.5kb downstream 500 false Chr08: 16393265-16393764 Glycine max
Glyma.08G202100 1.0kb upstream 1.0kb upstream 2175 true Chr08: 16391090-16393264 Glycine max
Glyma.08G202100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16391090-16392089 Glycine max
Glyma.08G202100 1.0kb downstream 1.0kb downstream 2175 true Chr08: 16392090-16394264 Glycine max
Glyma.08G202100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16393265-16394264 Glycine max
Glyma.08G202100 2.0kb upstream 2.0kb upstream 3175 true Chr08: 16390090-16393264 Glycine max
Glyma.08G202100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16390090-16392089 Glycine max
Glyma.08G202100 2.0kb downstream 2.0kb downstream 3175 true Chr08: 16392090-16395264 Glycine max
Glyma.08G202100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16393265-16395264 Glycine max
Glyma.08G202100 5.0kb upstream 5.0kb upstream 6175 true Chr08: 16387090-16393264 Glycine max
Glyma.08G202100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16387090-16392089 Glycine max
Glyma.08G202100 5.0kb downstream 5.0kb downstream 6175 true Chr08: 16392090-16398264 Glycine max
Glyma.08G202100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16393265-16398264 Glycine max
Glyma.08G202100 10.0kb upstream 10.0kb upstream 11175 true Chr08: 16382090-16393264 Glycine max
Glyma.08G202100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16382090-16392089 Glycine max
Glyma.08G202100 10.0kb downstream 10.0kb downstream 11175 true Chr08: 16392090-16403264 Glycine max
Glyma.08G202100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16393265-16403264 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240111 5265 Fabidae Singleton cluster - no MSA
124070320 5270 Rosid View MSA
123751273 5271 Pentapetalae View MSA
122797583 5272 Eudicot View MSA
122049564 5273 Angiosperm View MSA
121349341 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0965311 0.0 0.389279 Low Low
cufflinks 3.14239 0.0 10.4393    
cufflinks 1.58075 0.0 5.66207    
cufflinks 3.42953 0.0 11.2477    
cufflinks 14.5431 0.0 39.4569   High
cufflinks 4.5761 0.0 14.2475    
cufflinks 0.785035 0.0 2.89632    
cufflinks 2.62559 0.0 8.89776    
cufflinks 5.25397 0.0 16.1064    
cufflinks 4.004        
cufflinks 0.638        
cufflinks 2.443        
cufflinks 12.498     High High
cufflinks 29.779     High High
cufflinks 0.066       Low
cufflinks 1.523        
cufflinks 0.494        
cufflinks 12.115     High High
cufflinks 2.51        
cufflinks 0.735        
cufflinks 0.811        
cufflinks 0.828        
cufflinks 1.989        
cufflinks 0.377        
cufflinks 0.843        
cufflinks 2.4        

0 Strain