Gene : Glyma.08G202800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14009//PTHR14009:SF14 - LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN Genomic Order:  2028
Name:  ? Glyma.08G202800 Secondary Identifier:  ? PAC:30538460
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G202800 0.5kb upstream 0.5kb upstream 7340 true Chr08: 16451763-16459102 Glycine max
Glyma.08G202800 0.5kb upstream 0.5kb upstream 500 false Chr08: 16451763-16452262 Glycine max
Glyma.08G202800 0.5kb downstream 0.5kb downstream 7340 true Chr08: 16452263-16459602 Glycine max
Glyma.08G202800 0.5kb downstream 0.5kb downstream 500 false Chr08: 16459103-16459602 Glycine max
Glyma.08G202800 1.0kb upstream 1.0kb upstream 7840 true Chr08: 16451263-16459102 Glycine max
Glyma.08G202800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16451263-16452262 Glycine max
Glyma.08G202800 1.0kb downstream 1.0kb downstream 7840 true Chr08: 16452263-16460102 Glycine max
Glyma.08G202800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16459103-16460102 Glycine max
Glyma.08G202800 2.0kb upstream 2.0kb upstream 8840 true Chr08: 16450263-16459102 Glycine max
Glyma.08G202800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16450263-16452262 Glycine max
Glyma.08G202800 2.0kb downstream 2.0kb downstream 8840 true Chr08: 16452263-16461102 Glycine max
Glyma.08G202800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16459103-16461102 Glycine max
Glyma.08G202800 5.0kb upstream 5.0kb upstream 11840 true Chr08: 16447263-16459102 Glycine max
Glyma.08G202800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16447263-16452262 Glycine max
Glyma.08G202800 5.0kb downstream 5.0kb downstream 11840 true Chr08: 16452263-16464102 Glycine max
Glyma.08G202800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16459103-16464102 Glycine max
Glyma.08G202800 10.0kb upstream 10.0kb upstream 16840 true Chr08: 16442263-16459102 Glycine max
Glyma.08G202800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16442263-16452262 Glycine max
Glyma.08G202800 10.0kb downstream 10.0kb downstream 16840 true Chr08: 16452263-16469102 Glycine max
Glyma.08G202800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16459103-16469102 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304260 5265 Fabidae View MSA
124070078 5270 Rosid View MSA
123742349 5271 Pentapetalae View MSA
122794896 5272 Eudicot View MSA
122048841 5273 Angiosperm View MSA
121311134 5274 Embryophyte View MSA
123348473 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.04116 0.0 6.22804    
cufflinks 0.380376 0.0 2.90635   Low
cufflinks 6.2761 0.0 28.0866   High
cufflinks 1.46475 0.0 6.62574    
cufflinks 0.811644 0.0 4.34648    
cufflinks 5.15155 0.0 19.3314   High
cufflinks 3.09011 0.0 18.8908    
cufflinks 0.49695 0.0 2.98617   Low
cufflinks 0.947498 0.0 4.89452    
cufflinks 0.035     Low Low
cufflinks 1.034       High
cufflinks 0.49       High
cufflinks 0.179        
cufflinks 0.183        
cufflinks 0.373        
cufflinks 0.102        
cufflinks 0.033     Low Low
cufflinks 0.138        
cufflinks 0.054     Low Low
cufflinks 0.088     Low  
cufflinks 0.865       High
cufflinks 0.098        
cufflinks 0.061     Low  
cufflinks 0.416        
cufflinks 0.084     Low  
cufflinks 0.474        

0 Strain