Gene : Glyma.08G250900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22870:SF170 - REGULATOR OF CHROMOSOME CONDENSATION FAMILY PROTEIN Genomic Order:  2509
Name:  ? Glyma.08G250900 Secondary Identifier:  ? PAC:30539377
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G250900 0.5kb upstream 0.5kb upstream 5724 true Chr08: 21988232-21993955 Glycine max
Glyma.08G250900 0.5kb upstream 0.5kb upstream 500 false Chr08: 21993456-21993955 Glycine max
Glyma.08G250900 0.5kb downstream 0.5kb downstream 5724 true Chr08: 21987732-21993455 Glycine max
Glyma.08G250900 0.5kb downstream 0.5kb downstream 500 false Chr08: 21987732-21988231 Glycine max
Glyma.08G250900 1.0kb upstream 1.0kb upstream 6224 true Chr08: 21988232-21994455 Glycine max
Glyma.08G250900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21993456-21994455 Glycine max
Glyma.08G250900 1.0kb downstream 1.0kb downstream 6224 true Chr08: 21987232-21993455 Glycine max
Glyma.08G250900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21987232-21988231 Glycine max
Glyma.08G250900 2.0kb upstream 2.0kb upstream 7224 true Chr08: 21988232-21995455 Glycine max
Glyma.08G250900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21993456-21995455 Glycine max
Glyma.08G250900 2.0kb downstream 2.0kb downstream 7224 true Chr08: 21986232-21993455 Glycine max
Glyma.08G250900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21986232-21988231 Glycine max
Glyma.08G250900 5.0kb upstream 5.0kb upstream 10224 true Chr08: 21988232-21998455 Glycine max
Glyma.08G250900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21993456-21998455 Glycine max
Glyma.08G250900 5.0kb downstream 5.0kb downstream 10224 true Chr08: 21983232-21993455 Glycine max
Glyma.08G250900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21983232-21988231 Glycine max
Glyma.08G250900 10.0kb upstream 10.0kb upstream 15224 true Chr08: 21988232-22003455 Glycine max
Glyma.08G250900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21993456-22003455 Glycine max
Glyma.08G250900 10.0kb downstream 10.0kb downstream 15224 true Chr08: 21978232-21993455 Glycine max
Glyma.08G250900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21978232-21988231 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306091 5265 Fabidae View MSA
124066260 5270 Rosid View MSA
123748631 5271 Pentapetalae View MSA
122791533 5272 Eudicot View MSA
122046241 5273 Angiosperm View MSA
121310578 5274 Embryophyte View MSA
123348026 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.61536 0.0 25.2278    
cufflinks 4.80139 0.0 19.8044    
cufflinks 8.00556 0.0 29.1157   High
cufflinks 4.98911 0.0 20.3086    
cufflinks 2.87275 0.0 12.2292    
cufflinks 6.53691 0.0 24.6445    
cufflinks 1.68885 0.0 6.17326   Low
cufflinks 4.43131 0.0 16.0934    
cufflinks 4.3167 0.0 18.3178    
cufflinks 1.002        
cufflinks 0.628       Low
cufflinks 1.575       High
cufflinks 0.76        
cufflinks 0.493       Low
cufflinks 0.816        
cufflinks 1.432        
cufflinks 0.81        
cufflinks 1.719       High
cufflinks 1.159        
cufflinks 1.571       High
cufflinks 0.585       Low
cufflinks 1.625       High
cufflinks 1.532        
cufflinks 0.919        
cufflinks 1.36        
cufflinks 0.79        

0 Strain