Gene : Glyma.08G252800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Genomic Order:  2528
Name:  ? Glyma.08G252800 Secondary Identifier:  ? PAC:30537408
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G252800 0.5kb upstream 0.5kb upstream 4101 true Chr08: 22212700-22216800 Glycine max
Glyma.08G252800 0.5kb upstream 0.5kb upstream 500 false Chr08: 22212700-22213199 Glycine max
Glyma.08G252800 0.5kb downstream 0.5kb downstream 4101 true Chr08: 22213200-22217300 Glycine max
Glyma.08G252800 0.5kb downstream 0.5kb downstream 500 false Chr08: 22216801-22217300 Glycine max
Glyma.08G252800 1.0kb upstream 1.0kb upstream 4601 true Chr08: 22212200-22216800 Glycine max
Glyma.08G252800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22212200-22213199 Glycine max
Glyma.08G252800 1.0kb downstream 1.0kb downstream 4601 true Chr08: 22213200-22217800 Glycine max
Glyma.08G252800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22216801-22217800 Glycine max
Glyma.08G252800 2.0kb upstream 2.0kb upstream 5601 true Chr08: 22211200-22216800 Glycine max
Glyma.08G252800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22211200-22213199 Glycine max
Glyma.08G252800 2.0kb downstream 2.0kb downstream 5601 true Chr08: 22213200-22218800 Glycine max
Glyma.08G252800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22216801-22218800 Glycine max
Glyma.08G252800 5.0kb upstream 5.0kb upstream 8601 true Chr08: 22208200-22216800 Glycine max
Glyma.08G252800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22208200-22213199 Glycine max
Glyma.08G252800 5.0kb downstream 5.0kb downstream 8601 true Chr08: 22213200-22221800 Glycine max
Glyma.08G252800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22216801-22221800 Glycine max
Glyma.08G252800 10.0kb upstream 10.0kb upstream 13601 true Chr08: 22203200-22216800 Glycine max
Glyma.08G252800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22203200-22213199 Glycine max
Glyma.08G252800 10.0kb downstream 10.0kb downstream 13601 true Chr08: 22213200-22226800 Glycine max
Glyma.08G252800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22216801-22226800 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300056 5265 Fabidae View MSA
124070966 5270 Rosid View MSA
123742904 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.53261 0.0 21.414    
cufflinks 4.58861 0.0 13.9123    
cufflinks 8.48818 0.0 23.7111   High
cufflinks 7.58171 0.0 21.4802   High
cufflinks 4.49579 0.0 13.6718   Low
cufflinks 5.02429 0.0 15.0431    
cufflinks 6.74865 0.0 19.4501    
cufflinks 4.88192 0.0 14.6243    
cufflinks 5.0513 0.0 15.1105    
cufflinks 1.715        
cufflinks 1.537        
cufflinks 3.654       High
cufflinks 1.894        
cufflinks 1.665        
cufflinks 1.763        
cufflinks 1.911        
cufflinks 1.024       Low
cufflinks 2.38        
cufflinks 2.162        
cufflinks 2.142        
cufflinks 1.843        
cufflinks 2.122        
cufflinks 2.203        
cufflinks 2.197        
cufflinks 1.926        
cufflinks 1.194       Low

0 Strain