Gene : Glyma.08G238400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12677:SF5 - TVP38/TMEM64 FAMILY MEMBRANE PROTEIN YDJX Genomic Order:  2384
Name:  ? Glyma.08G238400 Secondary Identifier:  ? PAC:30537008
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G238400 0.5kb upstream 0.5kb upstream 10124 true Chr08: 20344390-20354513 Glycine max
Glyma.08G238400 0.5kb upstream 0.5kb upstream 500 false Chr08: 20354014-20354513 Glycine max
Glyma.08G238400 0.5kb downstream 0.5kb downstream 10124 true Chr08: 20343890-20354013 Glycine max
Glyma.08G238400 0.5kb downstream 0.5kb downstream 500 false Chr08: 20343890-20344389 Glycine max
Glyma.08G238400 1.0kb upstream 1.0kb upstream 10624 true Chr08: 20344390-20355013 Glycine max
Glyma.08G238400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20354014-20355013 Glycine max
Glyma.08G238400 1.0kb downstream 1.0kb downstream 10624 true Chr08: 20343390-20354013 Glycine max
Glyma.08G238400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20343390-20344389 Glycine max
Glyma.08G238400 2.0kb upstream 2.0kb upstream 11624 true Chr08: 20344390-20356013 Glycine max
Glyma.08G238400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20354014-20356013 Glycine max
Glyma.08G238400 2.0kb downstream 2.0kb downstream 11624 true Chr08: 20342390-20354013 Glycine max
Glyma.08G238400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20342390-20344389 Glycine max
Glyma.08G238400 5.0kb upstream 5.0kb upstream 14624 true Chr08: 20344390-20359013 Glycine max
Glyma.08G238400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20354014-20359013 Glycine max
Glyma.08G238400 5.0kb downstream 5.0kb downstream 14624 true Chr08: 20339390-20354013 Glycine max
Glyma.08G238400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20339390-20344389 Glycine max
Glyma.08G238400 10.0kb upstream 10.0kb upstream 19624 true Chr08: 20344390-20364013 Glycine max
Glyma.08G238400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20354014-20364013 Glycine max
Glyma.08G238400 10.0kb downstream 10.0kb downstream 19624 true Chr08: 20334390-20354013 Glycine max
Glyma.08G238400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20334390-20344389 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308776 5265 Fabidae View MSA
124061870 5270 Rosid View MSA
123739963 5271 Pentapetalae View MSA
122789847 5272 Eudicot View MSA
122045988 5273 Angiosperm View MSA
121348100 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.17 0.0 428.409 High High
cufflinks 26.4371 0.0 96.8466 High  
cufflinks 10.3906 0.0 47.5486    
cufflinks 16.3405 0.0 61.6974    
cufflinks 6.52484 0.0 28.2337    
cufflinks 6.1294 0.0 25.8068    
cufflinks 8.63326 0.0 34.6707    
cufflinks 18.1291 0.0 75.9635    
cufflinks 4.89383 0.0 22.7474   Low
cufflinks 1.429        
cufflinks 0.045     Low Low
cufflinks 0.698        
cufflinks 0.282        
cufflinks 0.285        
cufflinks 0.105        
cufflinks 4.008       High
cufflinks 0.172        
cufflinks 1.057        
cufflinks 1.638        
cufflinks 3.235       High
cufflinks 0.058     Low Low
cufflinks 3.819       High
cufflinks 3.832       High
cufflinks 0.06       Low
cufflinks 3.954       High
cufflinks 0.134        

0 Strain