Gene : Glyma.08G238500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12864:SF14 - RAN-BINDING PROTEINS 9/10 HOMOLOG Genomic Order:  2385
Name:  ? Glyma.08G238500 Secondary Identifier:  ? PAC:30539418
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G238500 0.5kb upstream 0.5kb upstream 8809 true Chr08: 20360926-20369734 Glycine max
Glyma.08G238500 0.5kb upstream 0.5kb upstream 500 false Chr08: 20360926-20361425 Glycine max
Glyma.08G238500 0.5kb downstream 0.5kb downstream 8809 true Chr08: 20361426-20370234 Glycine max
Glyma.08G238500 0.5kb downstream 0.5kb downstream 500 false Chr08: 20369735-20370234 Glycine max
Glyma.08G238500 1.0kb upstream 1.0kb upstream 9309 true Chr08: 20360426-20369734 Glycine max
Glyma.08G238500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20360426-20361425 Glycine max
Glyma.08G238500 1.0kb downstream 1.0kb downstream 9309 true Chr08: 20361426-20370734 Glycine max
Glyma.08G238500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20369735-20370734 Glycine max
Glyma.08G238500 2.0kb upstream 2.0kb upstream 10309 true Chr08: 20359426-20369734 Glycine max
Glyma.08G238500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20359426-20361425 Glycine max
Glyma.08G238500 2.0kb downstream 2.0kb downstream 10309 true Chr08: 20361426-20371734 Glycine max
Glyma.08G238500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20369735-20371734 Glycine max
Glyma.08G238500 5.0kb upstream 5.0kb upstream 13309 true Chr08: 20356426-20369734 Glycine max
Glyma.08G238500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20356426-20361425 Glycine max
Glyma.08G238500 5.0kb downstream 5.0kb downstream 13309 true Chr08: 20361426-20374734 Glycine max
Glyma.08G238500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20369735-20374734 Glycine max
Glyma.08G238500 10.0kb upstream 10.0kb upstream 18309 true Chr08: 20351426-20369734 Glycine max
Glyma.08G238500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20351426-20361425 Glycine max
Glyma.08G238500 10.0kb downstream 10.0kb downstream 18309 true Chr08: 20361426-20379734 Glycine max
Glyma.08G238500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20369735-20379734 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308740 5265 Fabidae View MSA
124067984 5270 Rosid View MSA
123741601 5271 Pentapetalae View MSA
122788253 5272 Eudicot View MSA
122046700 5273 Angiosperm View MSA
121346795 5274 Embryophyte View MSA
123424255 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8028 0.0 37.5942   Low
cufflinks 10.5933 0.0 36.8712   Low
cufflinks 13.6295 0.0 46.6909    
cufflinks 14.0004 0.0 53.1855    
cufflinks 12.359 0.0 47.2695    
cufflinks 13.999 0.0 48.0144    
cufflinks 10.8062 0.0 37.6678   Low
cufflinks 16.8079 0.0 57.5462   High
cufflinks 14.0933 0.0 53.4786    
cufflinks 0.868       High
cufflinks 0.446       Low
cufflinks 0.869       High
cufflinks 1.017       High
cufflinks 0.965       High
cufflinks 0.345       Low
cufflinks 0.638        
cufflinks 0.54        
cufflinks 0.72        
cufflinks 0.828        
cufflinks 0.544        
cufflinks 0.557        
cufflinks 0.639        
cufflinks 0.601        
cufflinks 0.484        
cufflinks 0.585        
cufflinks 0.671        

0 Strain