Gene : Glyma.08G238800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11200:SF136 - PHOSPHOINOSITIDE PHOSPHATASE SAC1 Genomic Order:  2388
Name:  ? Glyma.08G238800 Secondary Identifier:  ? PAC:30538519
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G238800 0.5kb upstream 0.5kb upstream 13570 true Chr08: 20382806-20396375 Glycine max
Glyma.08G238800 0.5kb upstream 0.5kb upstream 500 false Chr08: 20395876-20396375 Glycine max
Glyma.08G238800 0.5kb downstream 0.5kb downstream 13570 true Chr08: 20382306-20395875 Glycine max
Glyma.08G238800 0.5kb downstream 0.5kb downstream 500 false Chr08: 20382306-20382805 Glycine max
Glyma.08G238800 1.0kb upstream 1.0kb upstream 14070 true Chr08: 20382806-20396875 Glycine max
Glyma.08G238800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20395876-20396875 Glycine max
Glyma.08G238800 1.0kb downstream 1.0kb downstream 14070 true Chr08: 20381806-20395875 Glycine max
Glyma.08G238800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20381806-20382805 Glycine max
Glyma.08G238800 2.0kb upstream 2.0kb upstream 15070 true Chr08: 20382806-20397875 Glycine max
Glyma.08G238800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20395876-20397875 Glycine max
Glyma.08G238800 2.0kb downstream 2.0kb downstream 15070 true Chr08: 20380806-20395875 Glycine max
Glyma.08G238800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20380806-20382805 Glycine max
Glyma.08G238800 5.0kb upstream 5.0kb upstream 18070 true Chr08: 20382806-20400875 Glycine max
Glyma.08G238800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20395876-20400875 Glycine max
Glyma.08G238800 5.0kb downstream 5.0kb downstream 18070 true Chr08: 20377806-20395875 Glycine max
Glyma.08G238800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20377806-20382805 Glycine max
Glyma.08G238800 10.0kb upstream 10.0kb upstream 23070 true Chr08: 20382806-20405875 Glycine max
Glyma.08G238800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20395876-20405875 Glycine max
Glyma.08G238800 10.0kb downstream 10.0kb downstream 23070 true Chr08: 20372806-20395875 Glycine max
Glyma.08G238800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20372806-20382805 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308336 5265 Fabidae View MSA
124074413 5270 Rosid View MSA
123737573 5271 Pentapetalae View MSA
122791865 5272 Eudicot View MSA
122047437 5273 Angiosperm View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0267 0.0 37.6854    
cufflinks 7.10266 0.0 24.5469   Low
cufflinks 10.887 0.0 37.2167    
cufflinks 10.235 0.0 34.8077    
cufflinks 8.11167 0.0 27.9273    
cufflinks 8.82672 0.0 30.0137    
cufflinks 10.6673 0.0 36.3013    
cufflinks 10.8212 0.0 36.8846    
cufflinks 8.01333 0.0 27.3594    
cufflinks 1.291        
cufflinks 1.107        
cufflinks 1.473        
cufflinks 1.38        
cufflinks 1.5       High
cufflinks 0.778       Low
cufflinks 1.196        
cufflinks 0.817       Low
cufflinks 1.536       High
cufflinks 1.297        
cufflinks 1.359        
cufflinks 1.125        
cufflinks 1.476        
cufflinks 1.139        
cufflinks 1.352        
cufflinks 1.212        
cufflinks 1.045        

0 Strain