Gene : Glyma.08G238900 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2389
Name:  ? Glyma.08G238900 Secondary Identifier:  ? PAC:30537870
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G238900 0.5kb upstream 0.5kb upstream 2247 true Chr08: 20395971-20398217 Glycine max
Glyma.08G238900 0.5kb upstream 0.5kb upstream 500 false Chr08: 20395971-20396470 Glycine max
Glyma.08G238900 0.5kb downstream 0.5kb downstream 2247 true Chr08: 20396471-20398717 Glycine max
Glyma.08G238900 0.5kb downstream 0.5kb downstream 500 false Chr08: 20398218-20398717 Glycine max
Glyma.08G238900 1.0kb upstream 1.0kb upstream 2747 true Chr08: 20395471-20398217 Glycine max
Glyma.08G238900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20395471-20396470 Glycine max
Glyma.08G238900 1.0kb downstream 1.0kb downstream 2747 true Chr08: 20396471-20399217 Glycine max
Glyma.08G238900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20398218-20399217 Glycine max
Glyma.08G238900 2.0kb upstream 2.0kb upstream 3747 true Chr08: 20394471-20398217 Glycine max
Glyma.08G238900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20394471-20396470 Glycine max
Glyma.08G238900 2.0kb downstream 2.0kb downstream 3747 true Chr08: 20396471-20400217 Glycine max
Glyma.08G238900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20398218-20400217 Glycine max
Glyma.08G238900 5.0kb upstream 5.0kb upstream 6747 true Chr08: 20391471-20398217 Glycine max
Glyma.08G238900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20391471-20396470 Glycine max
Glyma.08G238900 5.0kb downstream 5.0kb downstream 6747 true Chr08: 20396471-20403217 Glycine max
Glyma.08G238900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20398218-20403217 Glycine max
Glyma.08G238900 10.0kb upstream 10.0kb upstream 11747 true Chr08: 20386471-20398217 Glycine max
Glyma.08G238900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20386471-20396470 Glycine max
Glyma.08G238900 10.0kb downstream 10.0kb downstream 11747 true Chr08: 20396471-20408217 Glycine max
Glyma.08G238900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20398218-20408217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302359 5265 Fabidae View MSA
124066946 5270 Rosid View MSA
123748514 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.31473 0.0 10.1919   High
cufflinks 2.75514 0.0 8.6886   High
cufflinks 1.9862 0.0 6.5208    
cufflinks 1.49056 0.0 5.09022   Low
cufflinks 1.98654 0.0 6.57325    
cufflinks 1.75031 0.0 5.87055    
cufflinks 1.89177 0.0 6.29008    
cufflinks 1.66694 0.0 5.61914    
cufflinks 2.6062 0.0 8.27674    
cufflinks 3.126        
cufflinks 2.386        
cufflinks 3.489        
cufflinks 2.274        
cufflinks 3.837        
cufflinks 2.971        
cufflinks 7.25     High High
cufflinks 1.424       Low
cufflinks 3.819        
cufflinks 4.034        
cufflinks 9.652     High High
cufflinks 2.069        
cufflinks 8.273     High High
cufflinks 7.0       High
cufflinks 2.525        
cufflinks 9.176     High High
cufflinks 1.688       Low

0 Strain