Gene : Glyma.08G239400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23241:SF50 - LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2394
Name:  ? Glyma.08G239400 Secondary Identifier:  ? PAC:30535507
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G239400 0.5kb upstream 0.5kb upstream 1970 true Chr08: 20441816-20443785 Glycine max
Glyma.08G239400 0.5kb upstream 0.5kb upstream 500 false Chr08: 20441816-20442315 Glycine max
Glyma.08G239400 0.5kb downstream 0.5kb downstream 1970 true Chr08: 20442316-20444285 Glycine max
Glyma.08G239400 0.5kb downstream 0.5kb downstream 500 false Chr08: 20443786-20444285 Glycine max
Glyma.08G239400 1.0kb upstream 1.0kb upstream 2470 true Chr08: 20441316-20443785 Glycine max
Glyma.08G239400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20441316-20442315 Glycine max
Glyma.08G239400 1.0kb downstream 1.0kb downstream 2470 true Chr08: 20442316-20444785 Glycine max
Glyma.08G239400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20443786-20444785 Glycine max
Glyma.08G239400 2.0kb upstream 2.0kb upstream 3470 true Chr08: 20440316-20443785 Glycine max
Glyma.08G239400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20440316-20442315 Glycine max
Glyma.08G239400 2.0kb downstream 2.0kb downstream 3470 true Chr08: 20442316-20445785 Glycine max
Glyma.08G239400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20443786-20445785 Glycine max
Glyma.08G239400 5.0kb upstream 5.0kb upstream 6470 true Chr08: 20437316-20443785 Glycine max
Glyma.08G239400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20437316-20442315 Glycine max
Glyma.08G239400 5.0kb downstream 5.0kb downstream 6470 true Chr08: 20442316-20448785 Glycine max
Glyma.08G239400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20443786-20448785 Glycine max
Glyma.08G239400 10.0kb upstream 10.0kb upstream 11470 true Chr08: 20432316-20443785 Glycine max
Glyma.08G239400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20432316-20442315 Glycine max
Glyma.08G239400 10.0kb downstream 10.0kb downstream 11470 true Chr08: 20442316-20453785 Glycine max
Glyma.08G239400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20443786-20453785 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310946 5265 Fabidae View MSA
124072864 5270 Rosid View MSA
123741808 5271 Pentapetalae View MSA
122794616 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0443831 0.0 0.183708 Low Low
cufflinks 0.10104 0.0 0.402614 Low  
cufflinks 0.327999 0.0 1.24544    
cufflinks 0.0637422 0.0 0.258628 Low  
cufflinks 0.176196 0.0 0.688032 Low  
cufflinks 0.32865 0.0 1.24902    
cufflinks 6.70525 0.0 19.1951   High
cufflinks 0.11502 0.0 0.455775 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.114        
cufflinks 0.076        
cufflinks 0.104     Low  
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.191       High
cufflinks 0.026     Low Low
cufflinks 0.133        
cufflinks 0.029     Low Low
cufflinks 0.072     Low  
cufflinks 0.025     Low Low
cufflinks 0.025     Low Low
cufflinks 0.228       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain