Gene : Glyma.08G239900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23324:SF48 - PATELLIN-3-RELATED Genomic Order:  2399
Name:  ? Glyma.08G239900 Secondary Identifier:  ? PAC:30536984
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G239900 0.5kb upstream 0.5kb upstream 3011 true Chr08: 20461840-20464850 Glycine max
Glyma.08G239900 0.5kb upstream 0.5kb upstream 500 false Chr08: 20461840-20462339 Glycine max
Glyma.08G239900 0.5kb downstream 0.5kb downstream 3011 true Chr08: 20462340-20465350 Glycine max
Glyma.08G239900 0.5kb downstream 0.5kb downstream 500 false Chr08: 20464851-20465350 Glycine max
Glyma.08G239900 1.0kb upstream 1.0kb upstream 3511 true Chr08: 20461340-20464850 Glycine max
Glyma.08G239900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20461340-20462339 Glycine max
Glyma.08G239900 1.0kb downstream 1.0kb downstream 3511 true Chr08: 20462340-20465850 Glycine max
Glyma.08G239900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20464851-20465850 Glycine max
Glyma.08G239900 2.0kb upstream 2.0kb upstream 4511 true Chr08: 20460340-20464850 Glycine max
Glyma.08G239900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20460340-20462339 Glycine max
Glyma.08G239900 2.0kb downstream 2.0kb downstream 4511 true Chr08: 20462340-20466850 Glycine max
Glyma.08G239900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20464851-20466850 Glycine max
Glyma.08G239900 5.0kb upstream 5.0kb upstream 7511 true Chr08: 20457340-20464850 Glycine max
Glyma.08G239900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20457340-20462339 Glycine max
Glyma.08G239900 5.0kb downstream 5.0kb downstream 7511 true Chr08: 20462340-20469850 Glycine max
Glyma.08G239900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20464851-20469850 Glycine max
Glyma.08G239900 10.0kb upstream 10.0kb upstream 12511 true Chr08: 20452340-20464850 Glycine max
Glyma.08G239900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20452340-20462339 Glycine max
Glyma.08G239900 10.0kb downstream 10.0kb downstream 12511 true Chr08: 20462340-20474850 Glycine max
Glyma.08G239900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20464851-20474850 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300244 5265 Fabidae View MSA
124069851 5270 Rosid View MSA
123749558 5271 Pentapetalae View MSA
122796481 5272 Eudicot View MSA
122048382 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350193 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.9274 0.0 194.158 High  
cufflinks 11.7233 0.0 40.1692    
cufflinks 138.963 0.0 997.695 High  
cufflinks 22.0676 0.0 82.6983 High  
cufflinks 40.5559 0.0 155.102 High  
cufflinks 442.026 0.0 8742.64 High High
cufflinks 1.91603 0.0 5.79124   Low
cufflinks 67.618 0.0 322.154 High  
cufflinks 55.1125 0.0 236.241 High  
cufflinks 44.18     High  
cufflinks 123.291     High High
cufflinks 49.606     High  
cufflinks 62.983     High  
cufflinks 27.468     High  
cufflinks 98.466     High High
cufflinks 10.726     High  
cufflinks 43.587     High  
cufflinks 7.514     High Low
cufflinks 10.586     High  
cufflinks 8.024     High Low
cufflinks 151.212     High High
cufflinks 9.293     High Low
cufflinks 7.412       Low
cufflinks 61.04     High  
cufflinks 9.858     High  
cufflinks 101.1     High High

0 Strain