Gene : Glyma.08G241300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12286:SF5 - SACCHAROPINE DEHYDROGENASE-LIKE OXIDOREDUCTASE Genomic Order:  2413
Name:  ? Glyma.08G241300 Secondary Identifier:  ? PAC:30541325
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G241300 0.5kb upstream 0.5kb upstream 3343 true Chr08: 20587621-20590963 Glycine max
Glyma.08G241300 0.5kb upstream 0.5kb upstream 500 false Chr08: 20587621-20588120 Glycine max
Glyma.08G241300 0.5kb downstream 0.5kb downstream 3343 true Chr08: 20588121-20591463 Glycine max
Glyma.08G241300 0.5kb downstream 0.5kb downstream 500 false Chr08: 20590964-20591463 Glycine max
Glyma.08G241300 1.0kb upstream 1.0kb upstream 3843 true Chr08: 20587121-20590963 Glycine max
Glyma.08G241300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20587121-20588120 Glycine max
Glyma.08G241300 1.0kb downstream 1.0kb downstream 3843 true Chr08: 20588121-20591963 Glycine max
Glyma.08G241300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20590964-20591963 Glycine max
Glyma.08G241300 2.0kb upstream 2.0kb upstream 4843 true Chr08: 20586121-20590963 Glycine max
Glyma.08G241300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20586121-20588120 Glycine max
Glyma.08G241300 2.0kb downstream 2.0kb downstream 4843 true Chr08: 20588121-20592963 Glycine max
Glyma.08G241300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20590964-20592963 Glycine max
Glyma.08G241300 5.0kb upstream 5.0kb upstream 7843 true Chr08: 20583121-20590963 Glycine max
Glyma.08G241300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20583121-20588120 Glycine max
Glyma.08G241300 5.0kb downstream 5.0kb downstream 7843 true Chr08: 20588121-20595963 Glycine max
Glyma.08G241300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20590964-20595963 Glycine max
Glyma.08G241300 10.0kb upstream 10.0kb upstream 12843 true Chr08: 20578121-20590963 Glycine max
Glyma.08G241300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20578121-20588120 Glycine max
Glyma.08G241300 10.0kb downstream 10.0kb downstream 12843 true Chr08: 20588121-20600963 Glycine max
Glyma.08G241300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20590964-20600963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304571 5265 Fabidae View MSA
124067639 5270 Rosid View MSA
123739811 5271 Pentapetalae View MSA
122786205 5272 Eudicot View MSA
122043116 5273 Angiosperm View MSA
123428910 5275 Viridiplantae View MSA
121350997 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9388 0.0 45.2255    
cufflinks 11.7466 0.0 31.7869    
cufflinks 13.4025 0.0 36.0724    
cufflinks 13.9518 0.0 37.4477    
cufflinks 10.3712 0.0 28.1467    
cufflinks 7.1556 0.0 20.0149   Low
cufflinks 31.4425 0.0 85.0347 High High
cufflinks 11.2612 0.0 30.5026    
cufflinks 10.5465 0.0 28.6611    
cufflinks 4.106       Low
cufflinks 3.786       Low
cufflinks 5.73        
cufflinks 4.686        
cufflinks 5.089        
cufflinks 4.057       Low
cufflinks 8.176     High High
cufflinks 6.273     High  
cufflinks 7.288     High  
cufflinks 7.355        
cufflinks 9.056     High High
cufflinks 4.506        
cufflinks 8.227     High High
cufflinks 8.547     High High
cufflinks 4.007       Low
cufflinks 7.599     High  
cufflinks 3.747       Low

0 Strain