Gene : Glyma.08G242100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11638:SF121 - CHAPERONE PROTEIN CLPB3, CHLOROPLASTIC Genomic Order:  2421
Name:  ? Glyma.08G242100 Secondary Identifier:  ? PAC:30539457
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G242100 0.5kb upstream 0.5kb upstream 7181 true Chr08: 20692480-20699660 Glycine max
Glyma.08G242100 0.5kb upstream 0.5kb upstream 500 false Chr08: 20699161-20699660 Glycine max
Glyma.08G242100 0.5kb downstream 0.5kb downstream 7181 true Chr08: 20691980-20699160 Glycine max
Glyma.08G242100 0.5kb downstream 0.5kb downstream 500 false Chr08: 20691980-20692479 Glycine max
Glyma.08G242100 1.0kb upstream 1.0kb upstream 7681 true Chr08: 20692480-20700160 Glycine max
Glyma.08G242100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20699161-20700160 Glycine max
Glyma.08G242100 1.0kb downstream 1.0kb downstream 7681 true Chr08: 20691480-20699160 Glycine max
Glyma.08G242100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20691480-20692479 Glycine max
Glyma.08G242100 2.0kb upstream 2.0kb upstream 8681 true Chr08: 20692480-20701160 Glycine max
Glyma.08G242100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20699161-20701160 Glycine max
Glyma.08G242100 2.0kb downstream 2.0kb downstream 8681 true Chr08: 20690480-20699160 Glycine max
Glyma.08G242100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20690480-20692479 Glycine max
Glyma.08G242100 5.0kb upstream 5.0kb upstream 11681 true Chr08: 20692480-20704160 Glycine max
Glyma.08G242100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20699161-20704160 Glycine max
Glyma.08G242100 5.0kb downstream 5.0kb downstream 11681 true Chr08: 20687480-20699160 Glycine max
Glyma.08G242100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20687480-20692479 Glycine max
Glyma.08G242100 10.0kb upstream 10.0kb upstream 16681 true Chr08: 20692480-20709160 Glycine max
Glyma.08G242100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20699161-20709160 Glycine max
Glyma.08G242100 10.0kb downstream 10.0kb downstream 16681 true Chr08: 20682480-20699160 Glycine max
Glyma.08G242100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20682480-20692479 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299690 5265 Fabidae View MSA
124062575 5270 Rosid View MSA
123743206 5271 Pentapetalae View MSA
122792663 5272 Eudicot View MSA
122044164 5273 Angiosperm View MSA
121345857 5274 Embryophyte View MSA
123426722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97123 0.0 12.9946    
cufflinks 1.74596 0.0 6.96701    
cufflinks 1.75214 0.0 6.70893    
cufflinks 8.93193 0.0 34.2297   High
cufflinks 3.49376 0.0 14.6417    
cufflinks 1.20885 0.0 5.24256   Low
cufflinks 4.6222 0.0 18.5731    
cufflinks 4.45367 0.0 17.8295    
cufflinks 3.39995 0.0 12.995    
cufflinks 0.384        
cufflinks 0.303        
cufflinks 0.991       High
cufflinks 0.292        
cufflinks 0.174        
cufflinks 0.439        
cufflinks 0.434        
cufflinks 0.098       Low
cufflinks 1.421       High
cufflinks 0.418        
cufflinks 0.543        
cufflinks 0.128       Low
cufflinks 0.566        
cufflinks 0.439        
cufflinks 0.073       Low
cufflinks 0.548        
cufflinks 0.134       Low

0 Strain