Gene : Glyma.08G234100 G. max Wm82.a2.v1
Defline:  (1 of 24) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Genomic Order:  2341
Name:  ? Glyma.08G234100 Secondary Identifier:  ? PAC:30537800
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G234100 0.5kb upstream 0.5kb upstream 1017 true Chr08: 19551923-19552939 Glycine max
Glyma.08G234100 0.5kb upstream 0.5kb upstream 500 false Chr08: 19552440-19552939 Glycine max
Glyma.08G234100 0.5kb downstream 0.5kb downstream 1017 true Chr08: 19551423-19552439 Glycine max
Glyma.08G234100 0.5kb downstream 0.5kb downstream 500 false Chr08: 19551423-19551922 Glycine max
Glyma.08G234100 1.0kb upstream 1.0kb upstream 1517 true Chr08: 19551923-19553439 Glycine max
Glyma.08G234100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19552440-19553439 Glycine max
Glyma.08G234100 1.0kb downstream 1.0kb downstream 1517 true Chr08: 19550923-19552439 Glycine max
Glyma.08G234100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19550923-19551922 Glycine max
Glyma.08G234100 2.0kb upstream 2.0kb upstream 2517 true Chr08: 19551923-19554439 Glycine max
Glyma.08G234100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19552440-19554439 Glycine max
Glyma.08G234100 2.0kb downstream 2.0kb downstream 2517 true Chr08: 19549923-19552439 Glycine max
Glyma.08G234100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19549923-19551922 Glycine max
Glyma.08G234100 5.0kb upstream 5.0kb upstream 5517 true Chr08: 19551923-19557439 Glycine max
Glyma.08G234100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19552440-19557439 Glycine max
Glyma.08G234100 5.0kb downstream 5.0kb downstream 5517 true Chr08: 19546923-19552439 Glycine max
Glyma.08G234100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19546923-19551922 Glycine max
Glyma.08G234100 10.0kb upstream 10.0kb upstream 10517 true Chr08: 19551923-19562439 Glycine max
Glyma.08G234100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19552440-19562439 Glycine max
Glyma.08G234100 10.0kb downstream 10.0kb downstream 10517 true Chr08: 19541923-19552439 Glycine max
Glyma.08G234100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19541923-19551922 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608458 5273 Angiosperm Singleton cluster - no MSA
122240257 5265 Fabidae Singleton cluster - no MSA
123985349 5270 Rosid Singleton cluster - no MSA
123560784 5271 Pentapetalae Singleton cluster - no MSA
122595581 5272 Eudicot Singleton cluster - no MSA
120880727 5274 Embryophyte Singleton cluster - no MSA
122921586 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.762858 0.0 3.02751   Low
cufflinks 102.839 0.0 276.594 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 168.872 0.0 450.764 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain