Gene : Glyma.08G235300 G. max Wm82.a2.v1
Defline:  (1 of 50) PF00197 - Trypsin and protease inhibitor (Kunitz_legume) Genomic Order:  2353
Name:  ? Glyma.08G235300 Secondary Identifier:  ? PAC:30537705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G235300 0.5kb upstream 0.5kb upstream 1742 true Chr08: 19776836-19778577 Glycine max
Glyma.08G235300 0.5kb upstream 0.5kb upstream 500 false Chr08: 19776836-19777335 Glycine max
Glyma.08G235300 0.5kb downstream 0.5kb downstream 1742 true Chr08: 19777336-19779077 Glycine max
Glyma.08G235300 0.5kb downstream 0.5kb downstream 500 false Chr08: 19778578-19779077 Glycine max
Glyma.08G235300 1.0kb upstream 1.0kb upstream 2242 true Chr08: 19776336-19778577 Glycine max
Glyma.08G235300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19776336-19777335 Glycine max
Glyma.08G235300 1.0kb downstream 1.0kb downstream 2242 true Chr08: 19777336-19779577 Glycine max
Glyma.08G235300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19778578-19779577 Glycine max
Glyma.08G235300 2.0kb upstream 2.0kb upstream 3242 true Chr08: 19775336-19778577 Glycine max
Glyma.08G235300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19775336-19777335 Glycine max
Glyma.08G235300 2.0kb downstream 2.0kb downstream 3242 true Chr08: 19777336-19780577 Glycine max
Glyma.08G235300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19778578-19780577 Glycine max
Glyma.08G235300 5.0kb upstream 5.0kb upstream 6242 true Chr08: 19772336-19778577 Glycine max
Glyma.08G235300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19772336-19777335 Glycine max
Glyma.08G235300 5.0kb downstream 5.0kb downstream 6242 true Chr08: 19777336-19783577 Glycine max
Glyma.08G235300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19778578-19783577 Glycine max
Glyma.08G235300 10.0kb upstream 10.0kb upstream 11242 true Chr08: 19767336-19778577 Glycine max
Glyma.08G235300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19767336-19777335 Glycine max
Glyma.08G235300 10.0kb downstream 10.0kb downstream 11242 true Chr08: 19777336-19788577 Glycine max
Glyma.08G235300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19778578-19788577 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309979 5265 Fabidae View MSA
124070415 5270 Rosid View MSA
123749279 5271 Pentapetalae View MSA
122795954 5272 Eudicot View MSA
122043570 5273 Angiosperm View MSA
121310150 5274 Embryophyte View MSA
123347719 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.173597 0.0 0.687692 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 168.621 0.0 522.438 High High
cufflinks 0.283616 0.0 1.10336    
cufflinks 1.30815 0.0 4.72598    
cufflinks 37.0806 0.0 99.0516 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.15355 0.0 4.20274    
cufflinks 1.8318 0.0 6.46213    
cufflinks 0.063     Low  
cufflinks 44.99     High High
cufflinks 64.92     High High
cufflinks 0.956        
cufflinks 1.389        
cufflinks 4.584        
cufflinks 0.088     Low  
cufflinks 0.195        
cufflinks 0.136        
cufflinks 0.173        
cufflinks 0.014     Low Low
cufflinks 18.404     High High
cufflinks 0.048     Low Low
cufflinks 0.068     Low  
cufflinks 41.31     High High
cufflinks 0.155        
cufflinks 12.137     High  

0 Strain