Gene : Glyma.08G235400 G. max Wm82.a2.v1
Defline:  (1 of 50) PF00197 - Trypsin and protease inhibitor (Kunitz_legume) Genomic Order:  2354
Name:  ? Glyma.08G235400 Secondary Identifier:  ? PAC:30541293
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G235400 0.5kb upstream 0.5kb upstream 1525 true Chr08: 19780764-19782288 Glycine max
Glyma.08G235400 0.5kb upstream 0.5kb upstream 500 false Chr08: 19780764-19781263 Glycine max
Glyma.08G235400 0.5kb downstream 0.5kb downstream 1525 true Chr08: 19781264-19782788 Glycine max
Glyma.08G235400 0.5kb downstream 0.5kb downstream 500 false Chr08: 19782289-19782788 Glycine max
Glyma.08G235400 1.0kb upstream 1.0kb upstream 2025 true Chr08: 19780264-19782288 Glycine max
Glyma.08G235400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19780264-19781263 Glycine max
Glyma.08G235400 1.0kb downstream 1.0kb downstream 2025 true Chr08: 19781264-19783288 Glycine max
Glyma.08G235400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19782289-19783288 Glycine max
Glyma.08G235400 2.0kb upstream 2.0kb upstream 3025 true Chr08: 19779264-19782288 Glycine max
Glyma.08G235400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19779264-19781263 Glycine max
Glyma.08G235400 2.0kb downstream 2.0kb downstream 3025 true Chr08: 19781264-19784288 Glycine max
Glyma.08G235400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19782289-19784288 Glycine max
Glyma.08G235400 5.0kb upstream 5.0kb upstream 6025 true Chr08: 19776264-19782288 Glycine max
Glyma.08G235400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19776264-19781263 Glycine max
Glyma.08G235400 5.0kb downstream 5.0kb downstream 6025 true Chr08: 19781264-19787288 Glycine max
Glyma.08G235400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19782289-19787288 Glycine max
Glyma.08G235400 10.0kb upstream 10.0kb upstream 11025 true Chr08: 19771264-19782288 Glycine max
Glyma.08G235400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19771264-19781263 Glycine max
Glyma.08G235400 10.0kb downstream 10.0kb downstream 11025 true Chr08: 19781264-19792288 Glycine max
Glyma.08G235400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19782289-19792288 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309979 5265 Fabidae View MSA
124070415 5270 Rosid View MSA
123749279 5271 Pentapetalae View MSA
122795954 5272 Eudicot View MSA
122043570 5273 Angiosperm View MSA
121310150 5274 Embryophyte View MSA
123347719 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.00058 0.0 10.2989    
cufflinks 0.181588 0.0 0.723575 Low Low
cufflinks 175.172 0.0 528.539 High High
cufflinks 2.15787 0.0 7.633    
cufflinks 7.32393 0.0 22.3392    
cufflinks 139.521 0.0 407.43 High High
cufflinks 1.64992 0.0 5.9485    
cufflinks 1.08509 0.0 4.01015    
cufflinks 8.87876 0.0 26.3613    
cufflinks 0.608       Low
cufflinks 412.093     High High
cufflinks 123.653     High High
cufflinks 6.111        
cufflinks 16.302     High  
cufflinks 39.833     High  
cufflinks 0.827        
cufflinks 1.696        
cufflinks 1.624        
cufflinks 2.364        
cufflinks 1.712        
cufflinks 139.075     High High
cufflinks 0.931        
cufflinks 0.628       Low
cufflinks 452.2     High High
cufflinks 1.8        
cufflinks 90.242     High  

0 Strain