Gene : Glyma.08G236000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10173:SF38 - PEPTIDE METHIONINE SULFOXIDE REDUCTASE B1, CHLOROPLASTIC Genomic Order:  2360
Name:  ? Glyma.08G236000 Secondary Identifier:  ? PAC:30536063
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G236000 0.5kb upstream 0.5kb upstream 4479 true Chr08: 19946007-19950485 Glycine max
Glyma.08G236000 0.5kb upstream 0.5kb upstream 500 false Chr08: 19949986-19950485 Glycine max
Glyma.08G236000 0.5kb downstream 0.5kb downstream 4479 true Chr08: 19945507-19949985 Glycine max
Glyma.08G236000 0.5kb downstream 0.5kb downstream 500 false Chr08: 19945507-19946006 Glycine max
Glyma.08G236000 1.0kb upstream 1.0kb upstream 4979 true Chr08: 19946007-19950985 Glycine max
Glyma.08G236000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19949986-19950985 Glycine max
Glyma.08G236000 1.0kb downstream 1.0kb downstream 4979 true Chr08: 19945007-19949985 Glycine max
Glyma.08G236000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19945007-19946006 Glycine max
Glyma.08G236000 2.0kb upstream 2.0kb upstream 5979 true Chr08: 19946007-19951985 Glycine max
Glyma.08G236000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19949986-19951985 Glycine max
Glyma.08G236000 2.0kb downstream 2.0kb downstream 5979 true Chr08: 19944007-19949985 Glycine max
Glyma.08G236000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19944007-19946006 Glycine max
Glyma.08G236000 5.0kb upstream 5.0kb upstream 8979 true Chr08: 19946007-19954985 Glycine max
Glyma.08G236000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19949986-19954985 Glycine max
Glyma.08G236000 5.0kb downstream 5.0kb downstream 8979 true Chr08: 19941007-19949985 Glycine max
Glyma.08G236000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19941007-19946006 Glycine max
Glyma.08G236000 10.0kb upstream 10.0kb upstream 13979 true Chr08: 19946007-19959985 Glycine max
Glyma.08G236000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19949986-19959985 Glycine max
Glyma.08G236000 10.0kb downstream 10.0kb downstream 13979 true Chr08: 19936007-19949985 Glycine max
Glyma.08G236000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19936007-19946006 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301625 5265 Fabidae View MSA
124067665 5270 Rosid View MSA
123746660 5271 Pentapetalae View MSA
122792336 5272 Eudicot View MSA
122047974 5273 Angiosperm View MSA
121348855 5274 Embryophyte View MSA
123426618 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 216.858 0.0 663.814 High High
cufflinks 23.5942 0.0 64.2315 High  
cufflinks 88.0814 0.0 241.423 High High
cufflinks 36.2972 0.0 97.0145 High  
cufflinks 5.60257 0.0 18.0817   Low
cufflinks 7.89627 0.0 24.2246    
cufflinks 12.5342 0.0 36.2551    
cufflinks 32.1057 0.0 86.1059 High  
cufflinks 5.7962 0.0 18.6214   Low
cufflinks 3.387        
cufflinks 1.989        
cufflinks 10.52     High High
cufflinks 0.359       Low
cufflinks 0.177       Low
cufflinks 0.753        
cufflinks 5.094        
cufflinks 1.156        
cufflinks 4.388        
cufflinks 3.526        
cufflinks 3.508        
cufflinks 1.368        
cufflinks 4.8        
cufflinks 5.212        
cufflinks 2.198        
cufflinks 5.949        
cufflinks 1.022        

0 Strain