Gene : Glyma.08G236800 G. max Wm82.a2.v1
Defline:  (1 of 1) PF15491 - CST, telomere maintenance, complex subunit CTC1 (CTC1_2) Genomic Order:  2368
Name:  ? Glyma.08G236800 Secondary Identifier:  ? PAC:30536932
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G236800 0.5kb upstream 0.5kb upstream 14910 true Chr08: 20067579-20082488 Glycine max
Glyma.08G236800 0.5kb upstream 0.5kb upstream 500 false Chr08: 20081989-20082488 Glycine max
Glyma.08G236800 0.5kb downstream 0.5kb downstream 14910 true Chr08: 20067079-20081988 Glycine max
Glyma.08G236800 0.5kb downstream 0.5kb downstream 500 false Chr08: 20067079-20067578 Glycine max
Glyma.08G236800 1.0kb upstream 1.0kb upstream 15410 true Chr08: 20067579-20082988 Glycine max
Glyma.08G236800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20081989-20082988 Glycine max
Glyma.08G236800 1.0kb downstream 1.0kb downstream 15410 true Chr08: 20066579-20081988 Glycine max
Glyma.08G236800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20066579-20067578 Glycine max
Glyma.08G236800 2.0kb upstream 2.0kb upstream 16410 true Chr08: 20067579-20083988 Glycine max
Glyma.08G236800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20081989-20083988 Glycine max
Glyma.08G236800 2.0kb downstream 2.0kb downstream 16410 true Chr08: 20065579-20081988 Glycine max
Glyma.08G236800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20065579-20067578 Glycine max
Glyma.08G236800 5.0kb upstream 5.0kb upstream 19410 true Chr08: 20067579-20086988 Glycine max
Glyma.08G236800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20081989-20086988 Glycine max
Glyma.08G236800 5.0kb downstream 5.0kb downstream 19410 true Chr08: 20062579-20081988 Glycine max
Glyma.08G236800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20062579-20067578 Glycine max
Glyma.08G236800 10.0kb upstream 10.0kb upstream 24410 true Chr08: 20067579-20091988 Glycine max
Glyma.08G236800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20081989-20091988 Glycine max
Glyma.08G236800 10.0kb downstream 10.0kb downstream 24410 true Chr08: 20057579-20081988 Glycine max
Glyma.08G236800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20057579-20067578 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304186 5265 Fabidae View MSA
124037153 5270 Rosid View MSA
123741449 5271 Pentapetalae View MSA
122790260 5272 Eudicot View MSA
122046572 5273 Angiosperm View MSA
121345821 5274 Embryophyte View MSA
123380273 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.427945 0.0 2.43646    
cufflinks 0.892816 0.0 5.85287    
cufflinks 1.01029 0.0 7.1872   High
cufflinks 0.410928 0.0 2.84331    
cufflinks 0.785401 0.0 7.11931    
cufflinks 0.317481 0.0 1.90416   Low
cufflinks 0.78546 0.0 4.65245    
cufflinks 0.287427 0.0 2.11712   Low
cufflinks 0.819056 0.0 4.69892    
cufflinks 0.018     Low Low
cufflinks 0.09        
cufflinks 0.061     Low  
cufflinks 0.054     Low  
cufflinks 0.077        
cufflinks 0.069        
cufflinks 0.057     Low  
cufflinks 0.046     Low  
cufflinks 0.043     Low  
cufflinks 0.117       High
cufflinks 0.05     Low  
cufflinks 0.094        
cufflinks 0.061     Low  
cufflinks 0.097     Low  
cufflinks 0.123       High
cufflinks 0.045     Low  
cufflinks 0.087        

0 Strain