Gene : Glyma.08G226400 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0253 - Synaptic vesicle transporter SV2 (major facilitator superfamily) Genomic Order:  2264
Name:  ? Glyma.08G226400 Secondary Identifier:  ? PAC:30538945
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G226400 0.5kb upstream 0.5kb upstream 4335 true Chr08: 18370226-18374560 Glycine max
Glyma.08G226400 0.5kb upstream 0.5kb upstream 500 false Chr08: 18374061-18374560 Glycine max
Glyma.08G226400 0.5kb downstream 0.5kb downstream 4335 true Chr08: 18369726-18374060 Glycine max
Glyma.08G226400 0.5kb downstream 0.5kb downstream 500 false Chr08: 18369726-18370225 Glycine max
Glyma.08G226400 1.0kb upstream 1.0kb upstream 4835 true Chr08: 18370226-18375060 Glycine max
Glyma.08G226400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18374061-18375060 Glycine max
Glyma.08G226400 1.0kb downstream 1.0kb downstream 4835 true Chr08: 18369226-18374060 Glycine max
Glyma.08G226400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18369226-18370225 Glycine max
Glyma.08G226400 2.0kb upstream 2.0kb upstream 5835 true Chr08: 18370226-18376060 Glycine max
Glyma.08G226400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18374061-18376060 Glycine max
Glyma.08G226400 2.0kb downstream 2.0kb downstream 5835 true Chr08: 18368226-18374060 Glycine max
Glyma.08G226400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18368226-18370225 Glycine max
Glyma.08G226400 5.0kb upstream 5.0kb upstream 8835 true Chr08: 18370226-18379060 Glycine max
Glyma.08G226400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18374061-18379060 Glycine max
Glyma.08G226400 5.0kb downstream 5.0kb downstream 8835 true Chr08: 18365226-18374060 Glycine max
Glyma.08G226400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18365226-18370225 Glycine max
Glyma.08G226400 10.0kb upstream 10.0kb upstream 13835 true Chr08: 18370226-18384060 Glycine max
Glyma.08G226400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18374061-18384060 Glycine max
Glyma.08G226400 10.0kb downstream 10.0kb downstream 13835 true Chr08: 18360226-18374060 Glycine max
Glyma.08G226400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18360226-18370225 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028498 5273 Angiosperm View MSA
122308128 5265 Fabidae View MSA
124061761 5270 Rosid View MSA
123749372 5271 Pentapetalae View MSA
122787311 5272 Eudicot View MSA
123429172 5275 Viridiplantae View MSA
121348293 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.97978 0.0 6.37274    
cufflinks 1.36703 0.0 4.61014    
cufflinks 0.875762 0.0 3.0794   Low
cufflinks 2.36432 0.0 7.39599    
cufflinks 2.91 0.0 8.87703    
cufflinks 10.0866 0.0 27.1291   High
cufflinks 3.05881 0.0 9.28104    
cufflinks 2.54257 0.0 7.88152    
cufflinks 3.53284 0.0 10.4577    
cufflinks 1.208        
cufflinks 1.374        
cufflinks 0.7       Low
cufflinks 2.556       High
cufflinks 2.029       High
cufflinks 0.685       Low
cufflinks 1.02        
cufflinks 1.343        
cufflinks 1.043        
cufflinks 1.401        
cufflinks 0.723       Low
cufflinks 1.753        
cufflinks 0.893        
cufflinks 1.032        
cufflinks 2.456       High
cufflinks 0.736       Low
cufflinks 1.468        

0 Strain