Gene : Glyma.08G226600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  2266
Name:  ? Glyma.08G226600 Secondary Identifier:  ? PAC:30539328
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5064 Glycine max pathologic  
Gmax PWY-5086 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G226600 0.5kb upstream 0.5kb upstream 12889 true Chr08: 18391180-18404068 Glycine max
Glyma.08G226600 0.5kb upstream 0.5kb upstream 500 false Chr08: 18403569-18404068 Glycine max
Glyma.08G226600 0.5kb downstream 0.5kb downstream 12889 true Chr08: 18390680-18403568 Glycine max
Glyma.08G226600 0.5kb downstream 0.5kb downstream 500 false Chr08: 18390680-18391179 Glycine max
Glyma.08G226600 1.0kb upstream 1.0kb upstream 13389 true Chr08: 18391180-18404568 Glycine max
Glyma.08G226600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18403569-18404568 Glycine max
Glyma.08G226600 1.0kb downstream 1.0kb downstream 13389 true Chr08: 18390180-18403568 Glycine max
Glyma.08G226600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18390180-18391179 Glycine max
Glyma.08G226600 2.0kb upstream 2.0kb upstream 14389 true Chr08: 18391180-18405568 Glycine max
Glyma.08G226600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18403569-18405568 Glycine max
Glyma.08G226600 2.0kb downstream 2.0kb downstream 14389 true Chr08: 18389180-18403568 Glycine max
Glyma.08G226600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18389180-18391179 Glycine max
Glyma.08G226600 5.0kb upstream 5.0kb upstream 17389 true Chr08: 18391180-18408568 Glycine max
Glyma.08G226600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18403569-18408568 Glycine max
Glyma.08G226600 5.0kb downstream 5.0kb downstream 17389 true Chr08: 18386180-18403568 Glycine max
Glyma.08G226600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18386180-18391179 Glycine max
Glyma.08G226600 10.0kb upstream 10.0kb upstream 22389 true Chr08: 18391180-18413568 Glycine max
Glyma.08G226600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18403569-18413568 Glycine max
Glyma.08G226600 10.0kb downstream 10.0kb downstream 22389 true Chr08: 18381180-18403568 Glycine max
Glyma.08G226600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18381180-18391179 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306443 5265 Fabidae View MSA
124060991 5270 Rosid View MSA
123739581 5271 Pentapetalae View MSA
122792894 5272 Eudicot View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.2499 0.0 418.71 High High
cufflinks 9.48851 0.0 37.3025    
cufflinks 8.77032 0.0 34.9634    
cufflinks 10.1773 0.0 39.3808    
cufflinks 2.36969 0.0 11.6231    
cufflinks 2.91539 0.0 10.8997    
cufflinks 3.14254 0.0 13.9807    
cufflinks 6.87901 0.0 25.37    
cufflinks 1.37496 0.0 5.10141   Low
cufflinks 0.712        
cufflinks 0.028     Low Low
cufflinks 0.332        
cufflinks 0.303        
cufflinks 0.128        
cufflinks 0.022     Low Low
cufflinks 2.486       High
cufflinks 0.077        
cufflinks 0.311        
cufflinks 0.835        
cufflinks 1.677       High
cufflinks 0.085        
cufflinks 2.341       High
cufflinks 1.439        
cufflinks 0.061       Low
cufflinks 2.639       High
cufflinks 0.149        

0 Strain