Gene : Glyma.08G226700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13808 - CBP/P300-RELATED Genomic Order:  2267
Name:  ? Glyma.08G226700 Secondary Identifier:  ? PAC:30541014
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G226700 0.5kb upstream 0.5kb upstream 15995 true Chr08: 18405334-18421328 Glycine max
Glyma.08G226700 0.5kb upstream 0.5kb upstream 500 false Chr08: 18420829-18421328 Glycine max
Glyma.08G226700 0.5kb downstream 0.5kb downstream 15995 true Chr08: 18404834-18420828 Glycine max
Glyma.08G226700 0.5kb downstream 0.5kb downstream 500 false Chr08: 18404834-18405333 Glycine max
Glyma.08G226700 1.0kb upstream 1.0kb upstream 16495 true Chr08: 18405334-18421828 Glycine max
Glyma.08G226700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18420829-18421828 Glycine max
Glyma.08G226700 1.0kb downstream 1.0kb downstream 16495 true Chr08: 18404334-18420828 Glycine max
Glyma.08G226700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18404334-18405333 Glycine max
Glyma.08G226700 2.0kb upstream 2.0kb upstream 17495 true Chr08: 18405334-18422828 Glycine max
Glyma.08G226700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18420829-18422828 Glycine max
Glyma.08G226700 2.0kb downstream 2.0kb downstream 17495 true Chr08: 18403334-18420828 Glycine max
Glyma.08G226700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18403334-18405333 Glycine max
Glyma.08G226700 5.0kb upstream 5.0kb upstream 20495 true Chr08: 18405334-18425828 Glycine max
Glyma.08G226700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18420829-18425828 Glycine max
Glyma.08G226700 5.0kb downstream 5.0kb downstream 20495 true Chr08: 18400334-18420828 Glycine max
Glyma.08G226700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18400334-18405333 Glycine max
Glyma.08G226700 10.0kb upstream 10.0kb upstream 25495 true Chr08: 18405334-18430828 Glycine max
Glyma.08G226700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18420829-18430828 Glycine max
Glyma.08G226700 10.0kb downstream 10.0kb downstream 25495 true Chr08: 18395334-18420828 Glycine max
Glyma.08G226700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18395334-18405333 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304294 5265 Fabidae View MSA
124067227 5270 Rosid View MSA
123747259 5271 Pentapetalae View MSA
122789535 5272 Eudicot View MSA
122047201 5273 Angiosperm View MSA
121350917 5274 Embryophyte View MSA
123426645 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.699 0.0 37.4259    
cufflinks 7.4014 0.0 22.3015    
cufflinks 20.3328 0.0 75.9298 High High
cufflinks 9.6668 0.0 30.0377    
cufflinks 7.32056 0.0 25.2993    
cufflinks 7.57534 0.0 26.4805    
cufflinks 11.0188 0.0 35.312    
cufflinks 8.74165 0.0 27.4245    
cufflinks 8.54507 0.0 26.3636    
cufflinks 1.57       Low
cufflinks 3.57       High
cufflinks 3.166        
cufflinks 1.879       Low
cufflinks 1.662       Low
cufflinks 3.401       High
cufflinks 2.629        
cufflinks 1.858       Low
cufflinks 2.416        
cufflinks 2.142        
cufflinks 2.893        
cufflinks 3.146        
cufflinks 2.811        
cufflinks 2.099        
cufflinks 3.508       High
cufflinks 2.678        
cufflinks 3.522       High

0 Strain