Gene : Glyma.08G230000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11527//PTHR11527:SF144 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Genomic Order:  2300
Name:  ? Glyma.08G230000 Secondary Identifier:  ? PAC:30538982
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G230000 0.5kb upstream 0.5kb upstream 3285 true Chr08: 18819571-18822855 Glycine max
Glyma.08G230000 0.5kb upstream 0.5kb upstream 500 false Chr08: 18822356-18822855 Glycine max
Glyma.08G230000 0.5kb downstream 0.5kb downstream 3285 true Chr08: 18819071-18822355 Glycine max
Glyma.08G230000 0.5kb downstream 0.5kb downstream 500 false Chr08: 18819071-18819570 Glycine max
Glyma.08G230000 1.0kb upstream 1.0kb upstream 3785 true Chr08: 18819571-18823355 Glycine max
Glyma.08G230000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18822356-18823355 Glycine max
Glyma.08G230000 1.0kb downstream 1.0kb downstream 3785 true Chr08: 18818571-18822355 Glycine max
Glyma.08G230000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18818571-18819570 Glycine max
Glyma.08G230000 2.0kb upstream 2.0kb upstream 4785 true Chr08: 18819571-18824355 Glycine max
Glyma.08G230000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18822356-18824355 Glycine max
Glyma.08G230000 2.0kb downstream 2.0kb downstream 4785 true Chr08: 18817571-18822355 Glycine max
Glyma.08G230000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18817571-18819570 Glycine max
Glyma.08G230000 5.0kb upstream 5.0kb upstream 7785 true Chr08: 18819571-18827355 Glycine max
Glyma.08G230000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18822356-18827355 Glycine max
Glyma.08G230000 5.0kb downstream 5.0kb downstream 7785 true Chr08: 18814571-18822355 Glycine max
Glyma.08G230000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18814571-18819570 Glycine max
Glyma.08G230000 10.0kb upstream 10.0kb upstream 12785 true Chr08: 18819571-18832355 Glycine max
Glyma.08G230000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18822356-18832355 Glycine max
Glyma.08G230000 10.0kb downstream 10.0kb downstream 12785 true Chr08: 18809571-18822355 Glycine max
Glyma.08G230000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18809571-18819570 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312292 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.543983 0.0 1.9574    
cufflinks 1.25905 0.0 4.18617    
cufflinks 1.21118 0.0 4.03814    
cufflinks 1.96614 0.0 6.10871    
cufflinks 1.73801 0.0 5.53444    
cufflinks 11.2181 0.0 29.949   High
cufflinks 0.0943097 0.0 0.368872 Low Low
cufflinks 5.06128 0.0 14.0016    
cufflinks 3.1725 0.0 9.28317    
cufflinks 9.778     High High
cufflinks 4.345        
cufflinks 2.374        
cufflinks 8.913     High High
cufflinks 1.738        
cufflinks 0.15       Low
cufflinks 2.738        
cufflinks 1.653        
cufflinks 4.759        
cufflinks 0.471       Low
cufflinks 3.103        
cufflinks 6.569     High  
cufflinks 2.849        
cufflinks 1.204        
cufflinks 2.528        
cufflinks 2.95        
cufflinks 5.03        

0 Strain