Gene : Glyma.08G230800 G. max Wm82.a2.v1
Defline:  (1 of 4) PF12049 - Protein of unknown function (DUF3531) (DUF3531) Genomic Order:  2308
Name:  ? Glyma.08G230800 Secondary Identifier:  ? PAC:30537307
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G230800 0.5kb upstream 0.5kb upstream 7884 true Chr08: 18911649-18919532 Glycine max
Glyma.08G230800 0.5kb upstream 0.5kb upstream 500 false Chr08: 18919033-18919532 Glycine max
Glyma.08G230800 0.5kb downstream 0.5kb downstream 7884 true Chr08: 18911149-18919032 Glycine max
Glyma.08G230800 0.5kb downstream 0.5kb downstream 500 false Chr08: 18911149-18911648 Glycine max
Glyma.08G230800 1.0kb upstream 1.0kb upstream 8384 true Chr08: 18911649-18920032 Glycine max
Glyma.08G230800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18919033-18920032 Glycine max
Glyma.08G230800 1.0kb downstream 1.0kb downstream 8384 true Chr08: 18910649-18919032 Glycine max
Glyma.08G230800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18910649-18911648 Glycine max
Glyma.08G230800 2.0kb upstream 2.0kb upstream 9384 true Chr08: 18911649-18921032 Glycine max
Glyma.08G230800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18919033-18921032 Glycine max
Glyma.08G230800 2.0kb downstream 2.0kb downstream 9384 true Chr08: 18909649-18919032 Glycine max
Glyma.08G230800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18909649-18911648 Glycine max
Glyma.08G230800 5.0kb upstream 5.0kb upstream 12384 true Chr08: 18911649-18924032 Glycine max
Glyma.08G230800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18919033-18924032 Glycine max
Glyma.08G230800 5.0kb downstream 5.0kb downstream 12384 true Chr08: 18906649-18919032 Glycine max
Glyma.08G230800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18906649-18911648 Glycine max
Glyma.08G230800 10.0kb upstream 10.0kb upstream 17384 true Chr08: 18911649-18929032 Glycine max
Glyma.08G230800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18919033-18929032 Glycine max
Glyma.08G230800 10.0kb downstream 10.0kb downstream 17384 true Chr08: 18901649-18919032 Glycine max
Glyma.08G230800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18901649-18911648 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310619 5265 Fabidae View MSA
124064322 5270 Rosid View MSA
123739536 5271 Pentapetalae View MSA
122788099 5272 Eudicot View MSA
122041579 5273 Angiosperm View MSA
121352142 5274 Embryophyte View MSA
123426298 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.66559 0.0 35.5676   High
cufflinks 7.12273 0.0 33.7245   High
cufflinks 3.28752 0.0 19.5408   Low
cufflinks 4.1049 0.0 23.1435    
cufflinks 4.3165 0.0 21.6853    
cufflinks 3.44073 0.0 20.6632    
cufflinks 4.01765 0.0 18.2457    
cufflinks 4.28263 0.0 18.5855    
cufflinks 3.69568 0.0 19.2582    
cufflinks 0.196        
cufflinks 0.019     Low Low
cufflinks 0.226        
cufflinks 0.234        
cufflinks 0.221        
cufflinks 0.064        
cufflinks 0.477       High
cufflinks 0.092        
cufflinks 0.254        
cufflinks 0.381        
cufflinks 0.476        
cufflinks 0.038     Low Low
cufflinks 0.475        
cufflinks 0.463        
cufflinks 0.034     Low Low
cufflinks 0.452        
cufflinks 0.073        

0 Strain