Gene : Glyma.08G272800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22691 - YEAST SPT2-RELATED Genomic Order:  2728
Name:  ? Glyma.08G272800 Secondary Identifier:  ? PAC:30535784
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G272800 0.5kb upstream 0.5kb upstream 6597 true Chr08: 35727652-35734248 Glycine max
Glyma.08G272800 0.5kb upstream 0.5kb upstream 500 false Chr08: 35733749-35734248 Glycine max
Glyma.08G272800 0.5kb downstream 0.5kb downstream 6597 true Chr08: 35727152-35733748 Glycine max
Glyma.08G272800 0.5kb downstream 0.5kb downstream 500 false Chr08: 35727152-35727651 Glycine max
Glyma.08G272800 1.0kb upstream 1.0kb upstream 7097 true Chr08: 35727652-35734748 Glycine max
Glyma.08G272800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 35733749-35734748 Glycine max
Glyma.08G272800 1.0kb downstream 1.0kb downstream 7097 true Chr08: 35726652-35733748 Glycine max
Glyma.08G272800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 35726652-35727651 Glycine max
Glyma.08G272800 2.0kb upstream 2.0kb upstream 8097 true Chr08: 35727652-35735748 Glycine max
Glyma.08G272800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 35733749-35735748 Glycine max
Glyma.08G272800 2.0kb downstream 2.0kb downstream 8097 true Chr08: 35725652-35733748 Glycine max
Glyma.08G272800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 35725652-35727651 Glycine max
Glyma.08G272800 5.0kb upstream 5.0kb upstream 11097 true Chr08: 35727652-35738748 Glycine max
Glyma.08G272800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 35733749-35738748 Glycine max
Glyma.08G272800 5.0kb downstream 5.0kb downstream 11097 true Chr08: 35722652-35733748 Glycine max
Glyma.08G272800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 35722652-35727651 Glycine max
Glyma.08G272800 10.0kb upstream 10.0kb upstream 16097 true Chr08: 35727652-35743748 Glycine max
Glyma.08G272800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 35733749-35743748 Glycine max
Glyma.08G272800 10.0kb downstream 10.0kb downstream 16097 true Chr08: 35717652-35733748 Glycine max
Glyma.08G272800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 35717652-35727651 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299938 5265 Fabidae View MSA
124067077 5270 Rosid View MSA
123739599 5271 Pentapetalae View MSA
122790641 5272 Eudicot View MSA
122048073 5273 Angiosperm View MSA
121347399 5274 Embryophyte View MSA
123427511 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.71142 0.0 25.9613   Low
cufflinks 9.87026 0.0 26.372   Low
cufflinks 11.2361 0.0 29.9769    
cufflinks 12.4316 0.0 33.1736   High
cufflinks 10.4861 0.0 28.0011    
cufflinks 11.8867 0.0 31.7122    
cufflinks 10.9472 0.0 29.2216    
cufflinks 10.9786 0.0 29.2938    
cufflinks 12.7755 0.0 34.0961   High
cufflinks 3.979       Low
cufflinks 10.474     High High
cufflinks 5.538        
cufflinks 5.612        
cufflinks 6.102        
cufflinks 8.797     High High
cufflinks 5.331        
cufflinks 3.63       Low
cufflinks 5.275        
cufflinks 5.222        
cufflinks 5.976        
cufflinks 7.935     High  
cufflinks 5.642        
cufflinks 4.7        
cufflinks 9.376     High High
cufflinks 5.728        
cufflinks 6.676     High  

0 Strain