Gene : Glyma.08G277000 G. max Wm82.a2.v1
Defline:  (1 of 13) 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Genomic Order:  2770
Name:  ? Glyma.08G277000 Secondary Identifier:  ? PAC:30535740
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7560 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G277000 0.5kb upstream 0.5kb upstream 5028 true Chr08: 37077189-37082216 Glycine max
Glyma.08G277000 0.5kb upstream 0.5kb upstream 500 false Chr08: 37077189-37077688 Glycine max
Glyma.08G277000 0.5kb downstream 0.5kb downstream 5028 true Chr08: 37077689-37082716 Glycine max
Glyma.08G277000 0.5kb downstream 0.5kb downstream 500 false Chr08: 37082217-37082716 Glycine max
Glyma.08G277000 1.0kb upstream 1.0kb upstream 5528 true Chr08: 37076689-37082216 Glycine max
Glyma.08G277000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 37076689-37077688 Glycine max
Glyma.08G277000 1.0kb downstream 1.0kb downstream 5528 true Chr08: 37077689-37083216 Glycine max
Glyma.08G277000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 37082217-37083216 Glycine max
Glyma.08G277000 2.0kb upstream 2.0kb upstream 6528 true Chr08: 37075689-37082216 Glycine max
Glyma.08G277000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 37075689-37077688 Glycine max
Glyma.08G277000 2.0kb downstream 2.0kb downstream 6528 true Chr08: 37077689-37084216 Glycine max
Glyma.08G277000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 37082217-37084216 Glycine max
Glyma.08G277000 5.0kb upstream 5.0kb upstream 9528 true Chr08: 37072689-37082216 Glycine max
Glyma.08G277000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 37072689-37077688 Glycine max
Glyma.08G277000 5.0kb downstream 5.0kb downstream 9528 true Chr08: 37077689-37087216 Glycine max
Glyma.08G277000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 37082217-37087216 Glycine max
Glyma.08G277000 10.0kb upstream 10.0kb upstream 14528 true Chr08: 37067689-37082216 Glycine max
Glyma.08G277000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 37067689-37077688 Glycine max
Glyma.08G277000 10.0kb downstream 10.0kb downstream 14528 true Chr08: 37077689-37092216 Glycine max
Glyma.08G277000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 37082217-37092216 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301533 5265 Fabidae View MSA
124070864 5270 Rosid View MSA
123742318 5271 Pentapetalae View MSA
122794630 5272 Eudicot View MSA
122048955 5273 Angiosperm View MSA
121351194 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.53738 0.0 12.5786    
cufflinks 0.406795 0.0 1.4785   Low
cufflinks 1.28846 0.0 4.17565    
cufflinks 0.550535 0.0 1.95829    
cufflinks 2.53627 0.0 7.52877    
cufflinks 13.4744 0.0 36.0328   High
cufflinks 0.213756 0.0 0.803718   Low
cufflinks 1.25869 0.0 4.10617    
cufflinks 3.06816 0.0 8.87133    
cufflinks 0.193       Low
cufflinks 19.038     High High
cufflinks 1.002        
cufflinks 3.868        
cufflinks 1.814        
cufflinks 11.057     High  
cufflinks 0.183       Low
cufflinks 5.598        
cufflinks 0.169       Low
cufflinks 0.807        
cufflinks 0.175       Low
cufflinks 16.056     High High
cufflinks 0.246        
cufflinks 0.183       Low
cufflinks 40.647     High High
cufflinks 0.271        
cufflinks 30.437     High High

0 Strain