Gene : Glyma.08G278700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR27001:SF105 - PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  2787
Name:  ? Glyma.08G278700 Secondary Identifier:  ? PAC:30540501
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G278700 0.5kb upstream 0.5kb upstream 5592 true Chr08: 37671574-37677165 Glycine max
Glyma.08G278700 0.5kb upstream 0.5kb upstream 500 false Chr08: 37671574-37672073 Glycine max
Glyma.08G278700 0.5kb downstream 0.5kb downstream 5592 true Chr08: 37672074-37677665 Glycine max
Glyma.08G278700 0.5kb downstream 0.5kb downstream 500 false Chr08: 37677166-37677665 Glycine max
Glyma.08G278700 1.0kb upstream 1.0kb upstream 6092 true Chr08: 37671074-37677165 Glycine max
Glyma.08G278700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 37671074-37672073 Glycine max
Glyma.08G278700 1.0kb downstream 1.0kb downstream 6092 true Chr08: 37672074-37678165 Glycine max
Glyma.08G278700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 37677166-37678165 Glycine max
Glyma.08G278700 2.0kb upstream 2.0kb upstream 7092 true Chr08: 37670074-37677165 Glycine max
Glyma.08G278700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 37670074-37672073 Glycine max
Glyma.08G278700 2.0kb downstream 2.0kb downstream 7092 true Chr08: 37672074-37679165 Glycine max
Glyma.08G278700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 37677166-37679165 Glycine max
Glyma.08G278700 5.0kb upstream 5.0kb upstream 10092 true Chr08: 37667074-37677165 Glycine max
Glyma.08G278700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 37667074-37672073 Glycine max
Glyma.08G278700 5.0kb downstream 5.0kb downstream 10092 true Chr08: 37672074-37682165 Glycine max
Glyma.08G278700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 37677166-37682165 Glycine max
Glyma.08G278700 10.0kb upstream 10.0kb upstream 15092 true Chr08: 37662074-37677165 Glycine max
Glyma.08G278700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 37662074-37672073 Glycine max
Glyma.08G278700 10.0kb downstream 10.0kb downstream 15092 true Chr08: 37672074-37687165 Glycine max
Glyma.08G278700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 37677166-37687165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299083 5265 Fabidae View MSA
124063504 5270 Rosid View MSA
123745294 5271 Pentapetalae View MSA
122793623 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0654877 0.0 0.26067 Low  
cufflinks 0.0454554 0.0 0.183537 Low  
cufflinks 12.9397 0.0 34.5248   High
cufflinks 0.196994 0.0 0.750354    
cufflinks 0.150499 0.0 0.580233 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.212214 0.0 0.805871    
cufflinks 0.110247 0.0 0.430465 Low  
cufflinks 0.0833736 0.0 0.328912 Low  
cufflinks 0.151        
cufflinks 0.123        
cufflinks 2.366       High
cufflinks 0.159        
cufflinks 0.043     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.074     Low  
cufflinks 0.116        
cufflinks 2.045       High
cufflinks 0.04     Low Low
cufflinks 0.115        
cufflinks 0.136        
cufflinks 0.11        
cufflinks 0.103     Low  
cufflinks 0.068        
cufflinks 0.109        
cufflinks 0.144        

0 Strain