Gene : Glyma.08G279600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR18937//PTHR18937:SF222 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Genomic Order:  2796
Name:  ? Glyma.08G279600 Secondary Identifier:  ? PAC:30536615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G279600 0.5kb upstream 0.5kb upstream 4912 true Chr08: 37823180-37828091 Glycine max
Glyma.08G279600 0.5kb upstream 0.5kb upstream 500 false Chr08: 37823180-37823679 Glycine max
Glyma.08G279600 0.5kb downstream 0.5kb downstream 4912 true Chr08: 37823680-37828591 Glycine max
Glyma.08G279600 0.5kb downstream 0.5kb downstream 500 false Chr08: 37828092-37828591 Glycine max
Glyma.08G279600 1.0kb upstream 1.0kb upstream 5412 true Chr08: 37822680-37828091 Glycine max
Glyma.08G279600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 37822680-37823679 Glycine max
Glyma.08G279600 1.0kb downstream 1.0kb downstream 5412 true Chr08: 37823680-37829091 Glycine max
Glyma.08G279600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 37828092-37829091 Glycine max
Glyma.08G279600 2.0kb upstream 2.0kb upstream 6412 true Chr08: 37821680-37828091 Glycine max
Glyma.08G279600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 37821680-37823679 Glycine max
Glyma.08G279600 2.0kb downstream 2.0kb downstream 6412 true Chr08: 37823680-37830091 Glycine max
Glyma.08G279600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 37828092-37830091 Glycine max
Glyma.08G279600 5.0kb upstream 5.0kb upstream 9412 true Chr08: 37818680-37828091 Glycine max
Glyma.08G279600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 37818680-37823679 Glycine max
Glyma.08G279600 5.0kb downstream 5.0kb downstream 9412 true Chr08: 37823680-37833091 Glycine max
Glyma.08G279600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 37828092-37833091 Glycine max
Glyma.08G279600 10.0kb upstream 10.0kb upstream 14412 true Chr08: 37813680-37828091 Glycine max
Glyma.08G279600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 37813680-37823679 Glycine max
Glyma.08G279600 10.0kb downstream 10.0kb downstream 14412 true Chr08: 37823680-37838091 Glycine max
Glyma.08G279600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 37828092-37838091 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122300642 5265 Fabidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023389 0.0 0.0943205 Low Low
cufflinks 3.64247 0.0 9.90311   High
cufflinks 0.379443 0.0 1.33575    
cufflinks 0.615678 0.0 2.07036    
cufflinks 1.62928 0.0 4.82737    
cufflinks 1.21912 0.0 3.75529    
cufflinks 0.657924 0.0 2.21423    
cufflinks 1.10938 0.0 3.44231    
cufflinks 1.99541 0.0 5.74284    
cufflinks 2.482        
cufflinks 0.197       Low
cufflinks 1.282        
cufflinks 4.124        
cufflinks 3.523        
cufflinks 0.022     Low Low
cufflinks 5.054        
cufflinks 0.214        
cufflinks 1.118        
cufflinks 4.107        
cufflinks 4.311        
cufflinks 0.238        
cufflinks 4.994        
cufflinks 5.016        
cufflinks 0.094       Low
cufflinks 5.012        
cufflinks 0.529        

0 Strain