Gene : Glyma.08G265800 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR19845 - KATANIN P80 SUBUNIT Genomic Order:  2658
Name:  ? Glyma.08G265800 Secondary Identifier:  ? PAC:30536365
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G265800 0.5kb upstream 0.5kb upstream 2085 true Chr08: 32072234-32074318 Glycine max
Glyma.08G265800 0.5kb upstream 0.5kb upstream 500 false Chr08: 32073819-32074318 Glycine max
Glyma.08G265800 0.5kb downstream 0.5kb downstream 2085 true Chr08: 32071734-32073818 Glycine max
Glyma.08G265800 0.5kb downstream 0.5kb downstream 500 false Chr08: 32071734-32072233 Glycine max
Glyma.08G265800 1.0kb upstream 1.0kb upstream 2585 true Chr08: 32072234-32074818 Glycine max
Glyma.08G265800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32073819-32074818 Glycine max
Glyma.08G265800 1.0kb downstream 1.0kb downstream 2585 true Chr08: 32071234-32073818 Glycine max
Glyma.08G265800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32071234-32072233 Glycine max
Glyma.08G265800 2.0kb upstream 2.0kb upstream 3585 true Chr08: 32072234-32075818 Glycine max
Glyma.08G265800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32073819-32075818 Glycine max
Glyma.08G265800 2.0kb downstream 2.0kb downstream 3585 true Chr08: 32070234-32073818 Glycine max
Glyma.08G265800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32070234-32072233 Glycine max
Glyma.08G265800 5.0kb upstream 5.0kb upstream 6585 true Chr08: 32072234-32078818 Glycine max
Glyma.08G265800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32073819-32078818 Glycine max
Glyma.08G265800 5.0kb downstream 5.0kb downstream 6585 true Chr08: 32067234-32073818 Glycine max
Glyma.08G265800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32067234-32072233 Glycine max
Glyma.08G265800 10.0kb upstream 10.0kb upstream 11585 true Chr08: 32072234-32083818 Glycine max
Glyma.08G265800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32073819-32083818 Glycine max
Glyma.08G265800 10.0kb downstream 10.0kb downstream 11585 true Chr08: 32062234-32073818 Glycine max
Glyma.08G265800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32062234-32072233 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240448 5265 Fabidae Singleton cluster - no MSA
124040389 5270 Rosid View MSA
123753307 5271 Pentapetalae View MSA
122797815 5272 Eudicot View MSA
122050667 5273 Angiosperm View MSA
121343955 5274 Embryophyte View MSA
123424287 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.074     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain