Gene : Glyma.08G269700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12560:SF13 - LAG1 LONGEVITY ASSURANCE HOMOLOG 1-RELATED Genomic Order:  2697
Name:  ? Glyma.08G269700 Secondary Identifier:  ? PAC:30541041
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G269700 0.5kb upstream 0.5kb upstream 10516 true Chr08: 34772472-34782987 Glycine max
Glyma.08G269700 0.5kb upstream 0.5kb upstream 500 false Chr08: 34782488-34782987 Glycine max
Glyma.08G269700 0.5kb downstream 0.5kb downstream 10516 true Chr08: 34771972-34782487 Glycine max
Glyma.08G269700 0.5kb downstream 0.5kb downstream 500 false Chr08: 34771972-34772471 Glycine max
Glyma.08G269700 1.0kb upstream 1.0kb upstream 11016 true Chr08: 34772472-34783487 Glycine max
Glyma.08G269700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 34782488-34783487 Glycine max
Glyma.08G269700 1.0kb downstream 1.0kb downstream 11016 true Chr08: 34771472-34782487 Glycine max
Glyma.08G269700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 34771472-34772471 Glycine max
Glyma.08G269700 2.0kb upstream 2.0kb upstream 12016 true Chr08: 34772472-34784487 Glycine max
Glyma.08G269700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 34782488-34784487 Glycine max
Glyma.08G269700 2.0kb downstream 2.0kb downstream 12016 true Chr08: 34770472-34782487 Glycine max
Glyma.08G269700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 34770472-34772471 Glycine max
Glyma.08G269700 5.0kb upstream 5.0kb upstream 15016 true Chr08: 34772472-34787487 Glycine max
Glyma.08G269700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 34782488-34787487 Glycine max
Glyma.08G269700 5.0kb downstream 5.0kb downstream 15016 true Chr08: 34767472-34782487 Glycine max
Glyma.08G269700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 34767472-34772471 Glycine max
Glyma.08G269700 10.0kb upstream 10.0kb upstream 20016 true Chr08: 34772472-34792487 Glycine max
Glyma.08G269700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 34782488-34792487 Glycine max
Glyma.08G269700 10.0kb downstream 10.0kb downstream 20016 true Chr08: 34762472-34782487 Glycine max
Glyma.08G269700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 34762472-34772471 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300980 5265 Fabidae View MSA
124065846 5270 Rosid View MSA
123739424 5271 Pentapetalae View MSA
122796577 5272 Eudicot View MSA
122046862 5273 Angiosperm View MSA
121348140 5274 Embryophyte View MSA
123428118 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.094 0.0 64.1851    
cufflinks 8.17483 0.0 29.6195   Low
cufflinks 35.0545 0.0 113.416 High High
cufflinks 13.1741 0.0 42.1328    
cufflinks 17.0091 0.0 55.9578    
cufflinks 43.4041 0.0 147.392 High High
cufflinks 9.57478 0.0 30.8886   Low
cufflinks 16.9061 0.0 54.6225    
cufflinks 19.1734 0.0 61.2085    
cufflinks 1.134        
cufflinks 2.765       High
cufflinks 1.682        
cufflinks 1.869        
cufflinks 1.772        
cufflinks 1.553        
cufflinks 0.86       Low
cufflinks 1.55        
cufflinks 1.158        
cufflinks 0.766       Low
cufflinks 0.957        
cufflinks 2.728       High
cufflinks 1.013        
cufflinks 0.741       Low
cufflinks 3.124       High
cufflinks 0.794       Low
cufflinks 2.038        

0 Strain