Gene : Glyma.08G260200 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR31086:SF20 - ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED Genomic Order:  2602
Name:  ? Glyma.08G260200 Secondary Identifier:  ? PAC:30539423
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G260200 0.5kb upstream 0.5kb upstream 5838 true Chr08: 23553082-23558919 Glycine max
Glyma.08G260200 0.5kb upstream 0.5kb upstream 500 false Chr08: 23558420-23558919 Glycine max
Glyma.08G260200 0.5kb downstream 0.5kb downstream 5838 true Chr08: 23552582-23558419 Glycine max
Glyma.08G260200 0.5kb downstream 0.5kb downstream 500 false Chr08: 23552582-23553081 Glycine max
Glyma.08G260200 1.0kb upstream 1.0kb upstream 6338 true Chr08: 23553082-23559419 Glycine max
Glyma.08G260200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 23558420-23559419 Glycine max
Glyma.08G260200 1.0kb downstream 1.0kb downstream 6338 true Chr08: 23552082-23558419 Glycine max
Glyma.08G260200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 23552082-23553081 Glycine max
Glyma.08G260200 2.0kb upstream 2.0kb upstream 7338 true Chr08: 23553082-23560419 Glycine max
Glyma.08G260200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 23558420-23560419 Glycine max
Glyma.08G260200 2.0kb downstream 2.0kb downstream 7338 true Chr08: 23551082-23558419 Glycine max
Glyma.08G260200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 23551082-23553081 Glycine max
Glyma.08G260200 5.0kb upstream 5.0kb upstream 10338 true Chr08: 23553082-23563419 Glycine max
Glyma.08G260200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 23558420-23563419 Glycine max
Glyma.08G260200 5.0kb downstream 5.0kb downstream 10338 true Chr08: 23548082-23558419 Glycine max
Glyma.08G260200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 23548082-23553081 Glycine max
Glyma.08G260200 10.0kb upstream 10.0kb upstream 15338 true Chr08: 23553082-23568419 Glycine max
Glyma.08G260200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 23558420-23568419 Glycine max
Glyma.08G260200 10.0kb downstream 10.0kb downstream 15338 true Chr08: 23543082-23558419 Glycine max
Glyma.08G260200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 23543082-23553081 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311564 5265 Fabidae View MSA
124050283 5270 Rosid View MSA
123751150 5271 Pentapetalae View MSA
122792195 5272 Eudicot View MSA
122047214 5273 Angiosperm View MSA
121351604 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.2491 0.0 4.23668   Low
cufflinks 1.9565 0.0 6.26165    
cufflinks 2.28388 0.0 7.15907    
cufflinks 3.89648 0.0 11.3156    
cufflinks 6.348 0.0 17.4805   High
cufflinks 3.68469 0.0 10.7695    
cufflinks 2.28956 0.0 7.14537    
cufflinks 3.37472 0.0 9.98551    
cufflinks 5.98246 0.0 16.577   High
cufflinks 0.475        
cufflinks 1.168        
cufflinks 0.884        
cufflinks 2.163       High
cufflinks 2.567       High
cufflinks 1.506        
cufflinks 0.445       Low
cufflinks 0.664        
cufflinks 1.451        
cufflinks 0.562        
cufflinks 0.496        
cufflinks 1.179        
cufflinks 0.55        
cufflinks 0.383       Low
cufflinks 1.429        
cufflinks 0.426       Low
cufflinks 0.674        

0 Strain