Gene : Glyma.08G262900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 Genomic Order:  2629
Name:  ? Glyma.08G262900 Secondary Identifier:  ? PAC:30538168
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G262900 0.5kb upstream 0.5kb upstream 11153 true Chr08: 28081097-28092249 Glycine max
Glyma.08G262900 0.5kb upstream 0.5kb upstream 500 false Chr08: 28081097-28081596 Glycine max
Glyma.08G262900 0.5kb downstream 0.5kb downstream 11153 true Chr08: 28081597-28092749 Glycine max
Glyma.08G262900 0.5kb downstream 0.5kb downstream 500 false Chr08: 28092250-28092749 Glycine max
Glyma.08G262900 1.0kb upstream 1.0kb upstream 11653 true Chr08: 28080597-28092249 Glycine max
Glyma.08G262900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 28080597-28081596 Glycine max
Glyma.08G262900 1.0kb downstream 1.0kb downstream 11653 true Chr08: 28081597-28093249 Glycine max
Glyma.08G262900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 28092250-28093249 Glycine max
Glyma.08G262900 2.0kb upstream 2.0kb upstream 12653 true Chr08: 28079597-28092249 Glycine max
Glyma.08G262900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 28079597-28081596 Glycine max
Glyma.08G262900 2.0kb downstream 2.0kb downstream 12653 true Chr08: 28081597-28094249 Glycine max
Glyma.08G262900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 28092250-28094249 Glycine max
Glyma.08G262900 5.0kb upstream 5.0kb upstream 15653 true Chr08: 28076597-28092249 Glycine max
Glyma.08G262900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 28076597-28081596 Glycine max
Glyma.08G262900 5.0kb downstream 5.0kb downstream 15653 true Chr08: 28081597-28097249 Glycine max
Glyma.08G262900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 28092250-28097249 Glycine max
Glyma.08G262900 10.0kb upstream 10.0kb upstream 20653 true Chr08: 28071597-28092249 Glycine max
Glyma.08G262900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 28071597-28081596 Glycine max
Glyma.08G262900 10.0kb downstream 10.0kb downstream 20653 true Chr08: 28081597-28102249 Glycine max
Glyma.08G262900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 28092250-28102249 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
122309404 5265 Fabidae View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.914 0.0 157.409 High Low
cufflinks 37.6244 0.0 184.613 High  
cufflinks 47.43 0.0 277.656 High  
cufflinks 35.9973 0.0 167.11 High  
cufflinks 41.9335 0.0 211.703 High  
cufflinks 55.2289 0.0 300.687 High High
cufflinks 43.7605 0.0 230.823 High  
cufflinks 35.9467 0.0 191.026 High  
cufflinks 38.2231 0.0 193.704 High  
cufflinks 0.776        
cufflinks 0.656       Low
cufflinks 0.908        
cufflinks 1.068       High
cufflinks 0.979       High
cufflinks 0.715        
cufflinks 0.738        
cufflinks 0.909        
cufflinks 0.836        
cufflinks 1.043       High
cufflinks 0.754        
cufflinks 0.64       Low
cufflinks 0.748        
cufflinks 0.823        
cufflinks 0.757        
cufflinks 0.678       Low
cufflinks 0.845        

0 Strain