Gene : Glyma.08G254800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR33228:SF3 - PROTEIN GLUTAMINE DUMPER 7 Genomic Order:  2548
Name:  ? Glyma.08G254800 Secondary Identifier:  ? PAC:30538425
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G254800 0.5kb upstream 0.5kb upstream 1295 true Chr08: 22526073-22527367 Glycine max
Glyma.08G254800 0.5kb upstream 0.5kb upstream 500 false Chr08: 22526868-22527367 Glycine max
Glyma.08G254800 0.5kb downstream 0.5kb downstream 1295 true Chr08: 22525573-22526867 Glycine max
Glyma.08G254800 0.5kb downstream 0.5kb downstream 500 false Chr08: 22525573-22526072 Glycine max
Glyma.08G254800 1.0kb upstream 1.0kb upstream 1795 true Chr08: 22526073-22527867 Glycine max
Glyma.08G254800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22526868-22527867 Glycine max
Glyma.08G254800 1.0kb downstream 1.0kb downstream 1795 true Chr08: 22525073-22526867 Glycine max
Glyma.08G254800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22525073-22526072 Glycine max
Glyma.08G254800 2.0kb upstream 2.0kb upstream 2795 true Chr08: 22526073-22528867 Glycine max
Glyma.08G254800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22526868-22528867 Glycine max
Glyma.08G254800 2.0kb downstream 2.0kb downstream 2795 true Chr08: 22524073-22526867 Glycine max
Glyma.08G254800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22524073-22526072 Glycine max
Glyma.08G254800 5.0kb upstream 5.0kb upstream 5795 true Chr08: 22526073-22531867 Glycine max
Glyma.08G254800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22526868-22531867 Glycine max
Glyma.08G254800 5.0kb downstream 5.0kb downstream 5795 true Chr08: 22521073-22526867 Glycine max
Glyma.08G254800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22521073-22526072 Glycine max
Glyma.08G254800 10.0kb upstream 10.0kb upstream 10795 true Chr08: 22526073-22536867 Glycine max
Glyma.08G254800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22526868-22536867 Glycine max
Glyma.08G254800 10.0kb downstream 10.0kb downstream 10795 true Chr08: 22516073-22526867 Glycine max
Glyma.08G254800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22516073-22526072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313286 5265 Fabidae View MSA
124071582 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.488071 0.0 1.89015    
cufflinks 0.397274 0.0 1.55052    
cufflinks 2.67979 0.0 9.47922    
cufflinks 0.696705 0.0 2.65858    
cufflinks 0.317199 0.0 1.2498   Low
cufflinks 3.3067 0.0 11.5327   High
cufflinks 0.647239 0.0 2.4726    
cufflinks 3.84385 0.0 13.1706   High
cufflinks 8.142     High High
cufflinks 6.005     High High
cufflinks 1.092        
cufflinks 1.19        
cufflinks 1.285        
cufflinks 6.314     High High
cufflinks 0.393        
cufflinks 0.326        
cufflinks 1.975        
cufflinks 0.266        
cufflinks 0.385        
cufflinks 8.055     High High
cufflinks 0.098       Low
cufflinks 0.093     Low Low
cufflinks 4.564        
cufflinks 0.372        
cufflinks 4.179        

0 Strain