Gene : Glyma.08G254900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR33228:SF3 - PROTEIN GLUTAMINE DUMPER 7 Genomic Order:  2549
Name:  ? Glyma.08G254900 Secondary Identifier:  ? PAC:30536392
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G254900 0.5kb upstream 0.5kb upstream 854 true Chr08: 22559888-22560741 Glycine max
Glyma.08G254900 0.5kb upstream 0.5kb upstream 500 false Chr08: 22560242-22560741 Glycine max
Glyma.08G254900 0.5kb downstream 0.5kb downstream 854 true Chr08: 22559388-22560241 Glycine max
Glyma.08G254900 0.5kb downstream 0.5kb downstream 500 false Chr08: 22559388-22559887 Glycine max
Glyma.08G254900 1.0kb upstream 1.0kb upstream 1354 true Chr08: 22559888-22561241 Glycine max
Glyma.08G254900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22560242-22561241 Glycine max
Glyma.08G254900 1.0kb downstream 1.0kb downstream 1354 true Chr08: 22558888-22560241 Glycine max
Glyma.08G254900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22558888-22559887 Glycine max
Glyma.08G254900 2.0kb upstream 2.0kb upstream 2354 true Chr08: 22559888-22562241 Glycine max
Glyma.08G254900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22560242-22562241 Glycine max
Glyma.08G254900 2.0kb downstream 2.0kb downstream 2354 true Chr08: 22557888-22560241 Glycine max
Glyma.08G254900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22557888-22559887 Glycine max
Glyma.08G254900 5.0kb upstream 5.0kb upstream 5354 true Chr08: 22559888-22565241 Glycine max
Glyma.08G254900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22560242-22565241 Glycine max
Glyma.08G254900 5.0kb downstream 5.0kb downstream 5354 true Chr08: 22554888-22560241 Glycine max
Glyma.08G254900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22554888-22559887 Glycine max
Glyma.08G254900 10.0kb upstream 10.0kb upstream 10354 true Chr08: 22559888-22570241 Glycine max
Glyma.08G254900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22560242-22570241 Glycine max
Glyma.08G254900 10.0kb downstream 10.0kb downstream 10354 true Chr08: 22549888-22560241 Glycine max
Glyma.08G254900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22549888-22559887 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313286 5265 Fabidae View MSA
124071582 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.498699 0.0 2.03458    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.312298 0.0 1.30692    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.723649 0.0 2.8979   High
cufflinks 0.248544 0.0 1.05926 Low Low
cufflinks 0.169        
cufflinks 2.044        
cufflinks 0.04     Low Low
cufflinks 0.193        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.655        
cufflinks 0.362        
cufflinks 1.62        
cufflinks 0.305        
cufflinks 0.064     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.996       High
cufflinks 0.307        
cufflinks 0.044     Low Low
cufflinks 2.786       High
cufflinks 0.062     Low Low
cufflinks 5.635       High

0 Strain