Gene : Glyma.08G257300 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2573
Name:  ? Glyma.08G257300 Secondary Identifier:  ? PAC:30537767
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G257300 0.5kb upstream 0.5kb upstream 3506 true Chr08: 23086154-23089659 Glycine max
Glyma.08G257300 0.5kb upstream 0.5kb upstream 500 false Chr08: 23089160-23089659 Glycine max
Glyma.08G257300 0.5kb downstream 0.5kb downstream 3506 true Chr08: 23085654-23089159 Glycine max
Glyma.08G257300 0.5kb downstream 0.5kb downstream 500 false Chr08: 23085654-23086153 Glycine max
Glyma.08G257300 1.0kb upstream 1.0kb upstream 4006 true Chr08: 23086154-23090159 Glycine max
Glyma.08G257300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 23089160-23090159 Glycine max
Glyma.08G257300 1.0kb downstream 1.0kb downstream 4006 true Chr08: 23085154-23089159 Glycine max
Glyma.08G257300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 23085154-23086153 Glycine max
Glyma.08G257300 2.0kb upstream 2.0kb upstream 5006 true Chr08: 23086154-23091159 Glycine max
Glyma.08G257300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 23089160-23091159 Glycine max
Glyma.08G257300 2.0kb downstream 2.0kb downstream 5006 true Chr08: 23084154-23089159 Glycine max
Glyma.08G257300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 23084154-23086153 Glycine max
Glyma.08G257300 5.0kb upstream 5.0kb upstream 8006 true Chr08: 23086154-23094159 Glycine max
Glyma.08G257300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 23089160-23094159 Glycine max
Glyma.08G257300 5.0kb downstream 5.0kb downstream 8006 true Chr08: 23081154-23089159 Glycine max
Glyma.08G257300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 23081154-23086153 Glycine max
Glyma.08G257300 10.0kb upstream 10.0kb upstream 13006 true Chr08: 23086154-23099159 Glycine max
Glyma.08G257300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 23089160-23099159 Glycine max
Glyma.08G257300 10.0kb downstream 10.0kb downstream 13006 true Chr08: 23076154-23089159 Glycine max
Glyma.08G257300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 23076154-23086153 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308061 5265 Fabidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.67466 0.0 8.99076   High
cufflinks 0.866588 0.0 3.1867    
cufflinks 1.49406 0.0 5.3011    
cufflinks 0.24678 0.0 0.960056    
cufflinks 0.345354 0.0 1.32557    
cufflinks 0.32868 0.0 1.26497    
cufflinks 0.0169921 0.0 0.0778275 Low Low
cufflinks 0.277553 0.0 1.07389    
cufflinks 0.308629 0.0 1.19033    
cufflinks 0.055     Low  
cufflinks 0.224        
cufflinks 0.535       High
cufflinks 0.038     Low  
cufflinks 0.198        
cufflinks 0.006     Low Low
cufflinks 0.087     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.177        
cufflinks 0.9       High
cufflinks 0.061     Low  
cufflinks 0.626       High
cufflinks 0.1        
cufflinks 0.074     Low  
cufflinks 0.374        
cufflinks 0.024     Low Low
cufflinks 0.025     Low Low

0 Strain