Gene : Glyma.08G257400 G. max Wm82.a2.v1
Defline:  (1 of 15) PF04059 - RNA recognition motif 2 (RRM_2) Genomic Order:  2574
Name:  ? Glyma.08G257400 Secondary Identifier:  ? PAC:30538243
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G257400 0.5kb upstream 0.5kb upstream 7437 true Chr08: 23117009-23124445 Glycine max
Glyma.08G257400 0.5kb upstream 0.5kb upstream 500 false Chr08: 23123946-23124445 Glycine max
Glyma.08G257400 0.5kb downstream 0.5kb downstream 7437 true Chr08: 23116509-23123945 Glycine max
Glyma.08G257400 0.5kb downstream 0.5kb downstream 500 false Chr08: 23116509-23117008 Glycine max
Glyma.08G257400 1.0kb upstream 1.0kb upstream 7937 true Chr08: 23117009-23124945 Glycine max
Glyma.08G257400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 23123946-23124945 Glycine max
Glyma.08G257400 1.0kb downstream 1.0kb downstream 7937 true Chr08: 23116009-23123945 Glycine max
Glyma.08G257400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 23116009-23117008 Glycine max
Glyma.08G257400 2.0kb upstream 2.0kb upstream 8937 true Chr08: 23117009-23125945 Glycine max
Glyma.08G257400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 23123946-23125945 Glycine max
Glyma.08G257400 2.0kb downstream 2.0kb downstream 8937 true Chr08: 23115009-23123945 Glycine max
Glyma.08G257400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 23115009-23117008 Glycine max
Glyma.08G257400 5.0kb upstream 5.0kb upstream 11937 true Chr08: 23117009-23128945 Glycine max
Glyma.08G257400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 23123946-23128945 Glycine max
Glyma.08G257400 5.0kb downstream 5.0kb downstream 11937 true Chr08: 23112009-23123945 Glycine max
Glyma.08G257400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 23112009-23117008 Glycine max
Glyma.08G257400 10.0kb upstream 10.0kb upstream 16937 true Chr08: 23117009-23133945 Glycine max
Glyma.08G257400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 23123946-23133945 Glycine max
Glyma.08G257400 10.0kb downstream 10.0kb downstream 16937 true Chr08: 23107009-23123945 Glycine max
Glyma.08G257400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 23107009-23117008 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027327 5273 Angiosperm View MSA
122310992 5265 Fabidae View MSA
124072187 5270 Rosid View MSA
123739010 5271 Pentapetalae View MSA
122788517 5272 Eudicot View MSA
121349156 5274 Embryophyte View MSA
123428382 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.71062 0.0 9.83609    
cufflinks 2.97232 0.0 12.2043    
cufflinks 3.46382 0.0 15.2689    
cufflinks 3.88345 0.0 17.0923   High
cufflinks 2.31532 0.0 10.5314   Low
cufflinks 2.79977 0.0 10.0081    
cufflinks 3.521 0.0 13.9626    
cufflinks 2.84688 0.0 11.8522    
cufflinks 3.00602 0.0 10.602    
cufflinks 0.348        
cufflinks 0.443        
cufflinks 0.49        
cufflinks 0.556        
cufflinks 0.307        
cufflinks 0.134       Low
cufflinks 0.499        
cufflinks 0.158       Low
cufflinks 0.583        
cufflinks 0.404        
cufflinks 0.685       High
cufflinks 0.467        
cufflinks 0.611        
cufflinks 0.383        
cufflinks 0.422        
cufflinks 0.579        
cufflinks 0.298        

0 Strain