Gene : Glyma.08G300800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10794:SF53 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  3008
Name:  ? Glyma.08G300800 Secondary Identifier:  ? PAC:30537077
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G300800 0.5kb upstream 0.5kb upstream 11662 true Chr08: 41890020-41901681 Glycine max
Glyma.08G300800 0.5kb upstream 0.5kb upstream 500 false Chr08: 41890020-41890519 Glycine max
Glyma.08G300800 0.5kb downstream 0.5kb downstream 11662 true Chr08: 41890520-41902181 Glycine max
Glyma.08G300800 0.5kb downstream 0.5kb downstream 500 false Chr08: 41901682-41902181 Glycine max
Glyma.08G300800 1.0kb upstream 1.0kb upstream 12162 true Chr08: 41889520-41901681 Glycine max
Glyma.08G300800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41889520-41890519 Glycine max
Glyma.08G300800 1.0kb downstream 1.0kb downstream 12162 true Chr08: 41890520-41902681 Glycine max
Glyma.08G300800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41901682-41902681 Glycine max
Glyma.08G300800 2.0kb upstream 2.0kb upstream 13162 true Chr08: 41888520-41901681 Glycine max
Glyma.08G300800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41888520-41890519 Glycine max
Glyma.08G300800 2.0kb downstream 2.0kb downstream 13162 true Chr08: 41890520-41903681 Glycine max
Glyma.08G300800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41901682-41903681 Glycine max
Glyma.08G300800 5.0kb upstream 5.0kb upstream 16162 true Chr08: 41885520-41901681 Glycine max
Glyma.08G300800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41885520-41890519 Glycine max
Glyma.08G300800 5.0kb downstream 5.0kb downstream 16162 true Chr08: 41890520-41906681 Glycine max
Glyma.08G300800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41901682-41906681 Glycine max
Glyma.08G300800 10.0kb upstream 10.0kb upstream 21162 true Chr08: 41880520-41901681 Glycine max
Glyma.08G300800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41880520-41890519 Glycine max
Glyma.08G300800 10.0kb downstream 10.0kb downstream 21162 true Chr08: 41890520-41911681 Glycine max
Glyma.08G300800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41901682-41911681 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305816 5265 Fabidae View MSA
124063785 5270 Rosid View MSA
123740423 5271 Pentapetalae View MSA
122790684 5272 Eudicot View MSA
122042712 5273 Angiosperm View MSA
121349023 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9496 0.0 49.4187   High
cufflinks 9.04526 0.0 39.3593   High
cufflinks 5.95893 0.0 30.6039    
cufflinks 3.55738 0.0 15.0256    
cufflinks 2.58184 0.0 14.7029    
cufflinks 2.21324 0.0 8.01096   Low
cufflinks 2.64418 0.0 14.4311    
cufflinks 4.98948 0.0 26.891    
cufflinks 2.40568 0.0 20.531    
cufflinks 0.11        
cufflinks 0.058        
cufflinks 0.097     Low  
cufflinks 0.026     Low Low
cufflinks 0.029     Low Low
cufflinks 0.219        
cufflinks 0.411       High
cufflinks 0.015     Low Low
cufflinks 0.092     Low  
cufflinks 0.179        
cufflinks 0.463       High
cufflinks 0.04     Low  
cufflinks 0.434       High
cufflinks 0.327       High
cufflinks 0.044     Low  
cufflinks 0.371       High
cufflinks 0.023     Low Low

0 Strain