Gene : Glyma.08G306200 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.5.1.18//2.5.1.32 - Glutathione transferase / S-(hydroxyalkyl)glutathione lyase // 15-cis-phytoene synthase / PSase Genomic Order:  3062
Name:  ? Glyma.08G306200 Secondary Identifier:  ? PAC:30540018
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CAROTENOID-PWY Glycine max pathologic  
Gmax PWY-6475 Glycine max pathologic  
Gmax PWY-6842 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G306200 0.5kb upstream 0.5kb upstream 4093 true Chr08: 42422270-42426362 Glycine max
Glyma.08G306200 0.5kb upstream 0.5kb upstream 500 false Chr08: 42425863-42426362 Glycine max
Glyma.08G306200 0.5kb downstream 0.5kb downstream 4093 true Chr08: 42421770-42425862 Glycine max
Glyma.08G306200 0.5kb downstream 0.5kb downstream 500 false Chr08: 42421770-42422269 Glycine max
Glyma.08G306200 1.0kb upstream 1.0kb upstream 4593 true Chr08: 42422270-42426862 Glycine max
Glyma.08G306200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42425863-42426862 Glycine max
Glyma.08G306200 1.0kb downstream 1.0kb downstream 4593 true Chr08: 42421270-42425862 Glycine max
Glyma.08G306200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42421270-42422269 Glycine max
Glyma.08G306200 2.0kb upstream 2.0kb upstream 5593 true Chr08: 42422270-42427862 Glycine max
Glyma.08G306200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42425863-42427862 Glycine max
Glyma.08G306200 2.0kb downstream 2.0kb downstream 5593 true Chr08: 42420270-42425862 Glycine max
Glyma.08G306200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42420270-42422269 Glycine max
Glyma.08G306200 5.0kb upstream 5.0kb upstream 8593 true Chr08: 42422270-42430862 Glycine max
Glyma.08G306200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42425863-42430862 Glycine max
Glyma.08G306200 5.0kb downstream 5.0kb downstream 8593 true Chr08: 42417270-42425862 Glycine max
Glyma.08G306200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42417270-42422269 Glycine max
Glyma.08G306200 10.0kb upstream 10.0kb upstream 13593 true Chr08: 42422270-42435862 Glycine max
Glyma.08G306200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42425863-42435862 Glycine max
Glyma.08G306200 10.0kb downstream 10.0kb downstream 13593 true Chr08: 42412270-42425862 Glycine max
Glyma.08G306200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42412270-42422269 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122312069 5265 Fabidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1517 0.0 51.1329   High
cufflinks 7.04235 0.0 19.5343    
cufflinks 10.8414 0.0 29.1783   High
cufflinks 3.70462 0.0 11.0578    
cufflinks 1.83903 0.0 6.07465    
cufflinks 1.2072 0.0 4.18022    
cufflinks 0.902466 0.0 3.20485   Low
cufflinks 2.93291 0.0 9.03912    
cufflinks 0.748625 0.0 2.69115   Low
cufflinks 3.381        
cufflinks 0.117       Low
cufflinks 4.603        
cufflinks 1.243        
cufflinks 1.356        
cufflinks 0.537        
cufflinks 15.549     High High
cufflinks 0.413        
cufflinks 1.937        
cufflinks 4.397        
cufflinks 17.009     High High
cufflinks 0.339       Low
cufflinks 17.204     High High
cufflinks 12.846     High High
cufflinks 0.182       Low
cufflinks 16.141     High High
cufflinks 0.358        

0 Strain