Gene : Glyma.08G307100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31719:SF5 - NAC DOMAIN-CONTAINING PROTEIN 6-RELATED Genomic Order:  3071
Name:  ? Glyma.08G307100 Secondary Identifier:  ? PAC:30535587
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G307100 0.5kb upstream 0.5kb upstream 6914 true Chr08: 42523058-42529971 Glycine max
Glyma.08G307100 0.5kb upstream 0.5kb upstream 500 false Chr08: 42523058-42523557 Glycine max
Glyma.08G307100 0.5kb downstream 0.5kb downstream 6914 true Chr08: 42523558-42530471 Glycine max
Glyma.08G307100 0.5kb downstream 0.5kb downstream 500 false Chr08: 42529972-42530471 Glycine max
Glyma.08G307100 1.0kb upstream 1.0kb upstream 7414 true Chr08: 42522558-42529971 Glycine max
Glyma.08G307100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42522558-42523557 Glycine max
Glyma.08G307100 1.0kb downstream 1.0kb downstream 7414 true Chr08: 42523558-42530971 Glycine max
Glyma.08G307100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42529972-42530971 Glycine max
Glyma.08G307100 2.0kb upstream 2.0kb upstream 8414 true Chr08: 42521558-42529971 Glycine max
Glyma.08G307100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42521558-42523557 Glycine max
Glyma.08G307100 2.0kb downstream 2.0kb downstream 8414 true Chr08: 42523558-42531971 Glycine max
Glyma.08G307100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42529972-42531971 Glycine max
Glyma.08G307100 5.0kb upstream 5.0kb upstream 11414 true Chr08: 42518558-42529971 Glycine max
Glyma.08G307100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42518558-42523557 Glycine max
Glyma.08G307100 5.0kb downstream 5.0kb downstream 11414 true Chr08: 42523558-42534971 Glycine max
Glyma.08G307100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42529972-42534971 Glycine max
Glyma.08G307100 10.0kb upstream 10.0kb upstream 16414 true Chr08: 42513558-42529971 Glycine max
Glyma.08G307100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42513558-42523557 Glycine max
Glyma.08G307100 10.0kb downstream 10.0kb downstream 16414 true Chr08: 42523558-42539971 Glycine max
Glyma.08G307100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42529972-42539971 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041469 5273 Angiosperm View MSA
122314218 5265 Fabidae View MSA
124071210 5270 Rosid View MSA
123741758 5271 Pentapetalae View MSA
122786697 5272 Eudicot View MSA
121309853 5274 Embryophyte View MSA
123347498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.2785 0.0 4.57204    
cufflinks 8.48819 0.0 24.2352   High
cufflinks 0.527358 0.0 1.97876    
cufflinks 0.67745 0.0 2.51388    
cufflinks 0.0155883 0.0 0.0716151 Low Low
cufflinks 0.817562 0.0 3.00632    
cufflinks 0.0316791 0.0 0.136439 Low Low
cufflinks 1.20727 0.0 4.33301    
cufflinks 0.128094 0.0 0.509891 Low  
cufflinks 0.871        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.256        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.003        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.603        
cufflinks 2.219        
cufflinks 1.514        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.557        
cufflinks 2.567        
cufflinks 0.003     Low Low
cufflinks 1.784        
cufflinks 0.049     Low Low

0 Strain