Gene : Glyma.08G294000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12565:SF107 - TRANSCRIPTION FACTOR BPE Genomic Order:  2940
Name:  ? Glyma.08G294000 Secondary Identifier:  ? PAC:30539034
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G294000 0.5kb upstream 0.5kb upstream 3237 true Chr08: 40917952-40921188 Glycine max
Glyma.08G294000 0.5kb upstream 0.5kb upstream 500 false Chr08: 40920689-40921188 Glycine max
Glyma.08G294000 0.5kb downstream 0.5kb downstream 3237 true Chr08: 40917452-40920688 Glycine max
Glyma.08G294000 0.5kb downstream 0.5kb downstream 500 false Chr08: 40917452-40917951 Glycine max
Glyma.08G294000 1.0kb upstream 1.0kb upstream 3737 true Chr08: 40917952-40921688 Glycine max
Glyma.08G294000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40920689-40921688 Glycine max
Glyma.08G294000 1.0kb downstream 1.0kb downstream 3737 true Chr08: 40916952-40920688 Glycine max
Glyma.08G294000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40916952-40917951 Glycine max
Glyma.08G294000 2.0kb upstream 2.0kb upstream 4737 true Chr08: 40917952-40922688 Glycine max
Glyma.08G294000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40920689-40922688 Glycine max
Glyma.08G294000 2.0kb downstream 2.0kb downstream 4737 true Chr08: 40915952-40920688 Glycine max
Glyma.08G294000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40915952-40917951 Glycine max
Glyma.08G294000 5.0kb upstream 5.0kb upstream 7737 true Chr08: 40917952-40925688 Glycine max
Glyma.08G294000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40920689-40925688 Glycine max
Glyma.08G294000 5.0kb downstream 5.0kb downstream 7737 true Chr08: 40912952-40920688 Glycine max
Glyma.08G294000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40912952-40917951 Glycine max
Glyma.08G294000 10.0kb upstream 10.0kb upstream 12737 true Chr08: 40917952-40930688 Glycine max
Glyma.08G294000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40920689-40930688 Glycine max
Glyma.08G294000 10.0kb downstream 10.0kb downstream 12737 true Chr08: 40907952-40920688 Glycine max
Glyma.08G294000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40907952-40917951 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310442 5265 Fabidae View MSA
124066126 5270 Rosid View MSA
123750840 5271 Pentapetalae View MSA
122787869 5272 Eudicot View MSA
122041891 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.99231 0.0 6.73312   Low
cufflinks 8.43707 0.0 23.6345   High
cufflinks 4.3409 0.0 13.2227    
cufflinks 3.81131 0.0 11.8041    
cufflinks 5.92782 0.0 17.223    
cufflinks 4.44703 0.0 13.4513    
cufflinks 5.67414 0.0 16.5989    
cufflinks 7.06822 0.0 20.1864    
cufflinks 2.99021 0.0 9.58581    
cufflinks 16.049     High High
cufflinks 0.532       Low
cufflinks 9.544     High  
cufflinks 3.361        
cufflinks 4.267        
cufflinks 0.445       Low
cufflinks 4.427        
cufflinks 1.367        
cufflinks 45.179     High High
cufflinks 5.863        
cufflinks 3.388        
cufflinks 0.967        
cufflinks 4.024        
cufflinks 3.497        
cufflinks 0.659       Low
cufflinks 3.593        
cufflinks 2.752        

0 Strain