Gene : Glyma.08G294300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11214:SF103 - BETA-1,3-GALACTOSYLTRANSFERASE 17-RELATED Genomic Order:  2943
Name:  ? Glyma.08G294300 Secondary Identifier:  ? PAC:30535862
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G294300 0.5kb upstream 0.5kb upstream 4743 true Chr08: 40953040-40957782 Glycine max
Glyma.08G294300 0.5kb upstream 0.5kb upstream 500 false Chr08: 40953040-40953539 Glycine max
Glyma.08G294300 0.5kb downstream 0.5kb downstream 4743 true Chr08: 40953540-40958282 Glycine max
Glyma.08G294300 0.5kb downstream 0.5kb downstream 500 false Chr08: 40957783-40958282 Glycine max
Glyma.08G294300 1.0kb upstream 1.0kb upstream 5243 true Chr08: 40952540-40957782 Glycine max
Glyma.08G294300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40952540-40953539 Glycine max
Glyma.08G294300 1.0kb downstream 1.0kb downstream 5243 true Chr08: 40953540-40958782 Glycine max
Glyma.08G294300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40957783-40958782 Glycine max
Glyma.08G294300 2.0kb upstream 2.0kb upstream 6243 true Chr08: 40951540-40957782 Glycine max
Glyma.08G294300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40951540-40953539 Glycine max
Glyma.08G294300 2.0kb downstream 2.0kb downstream 6243 true Chr08: 40953540-40959782 Glycine max
Glyma.08G294300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40957783-40959782 Glycine max
Glyma.08G294300 5.0kb upstream 5.0kb upstream 9243 true Chr08: 40948540-40957782 Glycine max
Glyma.08G294300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40948540-40953539 Glycine max
Glyma.08G294300 5.0kb downstream 5.0kb downstream 9243 true Chr08: 40953540-40962782 Glycine max
Glyma.08G294300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40957783-40962782 Glycine max
Glyma.08G294300 10.0kb upstream 10.0kb upstream 14243 true Chr08: 40943540-40957782 Glycine max
Glyma.08G294300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40943540-40953539 Glycine max
Glyma.08G294300 10.0kb downstream 10.0kb downstream 14243 true Chr08: 40953540-40967782 Glycine max
Glyma.08G294300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40957783-40967782 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313000 5265 Fabidae View MSA
124070105 5270 Rosid View MSA
123744575 5271 Pentapetalae View MSA
122795543 5272 Eudicot View MSA
122042506 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.611811 0.0 2.16849   Low
cufflinks 2.23637 0.0 6.78745    
cufflinks 0.321457 0.0 1.18441   Low
cufflinks 2.37663 0.0 7.1361    
cufflinks 2.45901 0.0 7.37536    
cufflinks 5.57102 0.0 15.253   High
cufflinks 3.76117 0.0 10.6669    
cufflinks 1.8419 0.0 5.7337    
cufflinks 1.54685 0.0 4.94558    
cufflinks 1.864        
cufflinks 0.797        
cufflinks 1.15        
cufflinks 3.608       High
cufflinks 3.058       High
cufflinks 0.302       Low
cufflinks 1.553        
cufflinks 0.638        
cufflinks 1.636        
cufflinks 2.094        
cufflinks 1.008        
cufflinks 0.651        
cufflinks 1.159        
cufflinks 1.486        
cufflinks 0.379       Low
cufflinks 1.119        
cufflinks 0.885        

0 Strain