Gene : Glyma.08G294800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31205:SF2 - ACTIN CROSS-LINKING PROTEIN Genomic Order:  2948
Name:  ? Glyma.08G294800 Secondary Identifier:  ? PAC:30540319
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G294800 0.5kb upstream 0.5kb upstream 8168 true Chr08: 40993462-41001629 Glycine max
Glyma.08G294800 0.5kb upstream 0.5kb upstream 500 false Chr08: 40993462-40993961 Glycine max
Glyma.08G294800 0.5kb downstream 0.5kb downstream 8168 true Chr08: 40993962-41002129 Glycine max
Glyma.08G294800 0.5kb downstream 0.5kb downstream 500 false Chr08: 41001630-41002129 Glycine max
Glyma.08G294800 1.0kb upstream 1.0kb upstream 8668 true Chr08: 40992962-41001629 Glycine max
Glyma.08G294800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40992962-40993961 Glycine max
Glyma.08G294800 1.0kb downstream 1.0kb downstream 8668 true Chr08: 40993962-41002629 Glycine max
Glyma.08G294800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41001630-41002629 Glycine max
Glyma.08G294800 2.0kb upstream 2.0kb upstream 9668 true Chr08: 40991962-41001629 Glycine max
Glyma.08G294800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40991962-40993961 Glycine max
Glyma.08G294800 2.0kb downstream 2.0kb downstream 9668 true Chr08: 40993962-41003629 Glycine max
Glyma.08G294800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41001630-41003629 Glycine max
Glyma.08G294800 5.0kb upstream 5.0kb upstream 12668 true Chr08: 40988962-41001629 Glycine max
Glyma.08G294800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40988962-40993961 Glycine max
Glyma.08G294800 5.0kb downstream 5.0kb downstream 12668 true Chr08: 40993962-41006629 Glycine max
Glyma.08G294800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41001630-41006629 Glycine max
Glyma.08G294800 10.0kb upstream 10.0kb upstream 17668 true Chr08: 40983962-41001629 Glycine max
Glyma.08G294800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40983962-40993961 Glycine max
Glyma.08G294800 10.0kb downstream 10.0kb downstream 17668 true Chr08: 40993962-41011629 Glycine max
Glyma.08G294800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41001630-41011629 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301703 5265 Fabidae View MSA
124067257 5270 Rosid View MSA
123752337 5271 Pentapetalae View MSA
122792795 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.60492 0.0 25.8081    
cufflinks 2.78064 0.0 8.45926    
cufflinks 8.19836 0.0 22.2646    
cufflinks 3.84443 0.0 11.1922    
cufflinks 7.16352 0.0 19.5071    
cufflinks 13.5367 0.0 36.1167   High
cufflinks 1.16414 0.0 3.96529   Low
cufflinks 8.3138 0.0 22.5083    
cufflinks 5.73029 0.0 15.9091    
cufflinks 6.636       High
cufflinks 3.674        
cufflinks 2.828        
cufflinks 3.309        
cufflinks 2.351        
cufflinks 2.285        
cufflinks 1.551        
cufflinks 16.721     High High
cufflinks 2.261        
cufflinks 0.975       Low
cufflinks 1.161       Low
cufflinks 1.917        
cufflinks 1.43        
cufflinks 1.843        
cufflinks 4.356        
cufflinks 1.272        
cufflinks 6.143       High

0 Strain