Gene : Glyma.08G297000 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2970
Name:  ? Glyma.08G297000 Secondary Identifier:  ? PAC:30536524
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G297000 0.5kb upstream 0.5kb upstream 3313 true Chr08: 41325871-41329183 Glycine max
Glyma.08G297000 0.5kb upstream 0.5kb upstream 500 false Chr08: 41325871-41326370 Glycine max
Glyma.08G297000 0.5kb downstream 0.5kb downstream 3313 true Chr08: 41326371-41329683 Glycine max
Glyma.08G297000 0.5kb downstream 0.5kb downstream 500 false Chr08: 41329184-41329683 Glycine max
Glyma.08G297000 1.0kb upstream 1.0kb upstream 3813 true Chr08: 41325371-41329183 Glycine max
Glyma.08G297000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41325371-41326370 Glycine max
Glyma.08G297000 1.0kb downstream 1.0kb downstream 3813 true Chr08: 41326371-41330183 Glycine max
Glyma.08G297000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41329184-41330183 Glycine max
Glyma.08G297000 2.0kb upstream 2.0kb upstream 4813 true Chr08: 41324371-41329183 Glycine max
Glyma.08G297000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41324371-41326370 Glycine max
Glyma.08G297000 2.0kb downstream 2.0kb downstream 4813 true Chr08: 41326371-41331183 Glycine max
Glyma.08G297000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41329184-41331183 Glycine max
Glyma.08G297000 5.0kb upstream 5.0kb upstream 7813 true Chr08: 41321371-41329183 Glycine max
Glyma.08G297000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41321371-41326370 Glycine max
Glyma.08G297000 5.0kb downstream 5.0kb downstream 7813 true Chr08: 41326371-41334183 Glycine max
Glyma.08G297000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41329184-41334183 Glycine max
Glyma.08G297000 10.0kb upstream 10.0kb upstream 12813 true Chr08: 41316371-41329183 Glycine max
Glyma.08G297000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41316371-41326370 Glycine max
Glyma.08G297000 10.0kb downstream 10.0kb downstream 12813 true Chr08: 41326371-41339183 Glycine max
Glyma.08G297000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41329184-41339183 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305611 5265 Fabidae View MSA
124070741 5270 Rosid View MSA
123749624 5271 Pentapetalae View MSA
122795805 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.38985 0.0 7.75755   High
cufflinks 0.361775 0.0 1.36306    
cufflinks 0.0965038 0.0 0.382989 Low  
cufflinks 0.212421 0.0 0.818493    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0249732 0.0 0.107023 Low Low
cufflinks 7.70516 0.0 21.496   High
cufflinks 0.0386905 0.0 0.160226 Low  
cufflinks 0.107387 0.0 0.425423 Low  
cufflinks 0.027     Low Low
cufflinks 0.02     Low Low
cufflinks 0.23        
cufflinks 0.046     Low  
cufflinks 0.076        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.3        
cufflinks 0.016     Low Low
cufflinks 0.16        
cufflinks 0.215        
cufflinks 0.65       High
cufflinks 0.05     Low  
cufflinks 0.919       High
cufflinks 1.478       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.699       High
cufflinks 0.045     Low  

0 Strain