Gene : Glyma.08G290100 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR24078:SF279 - DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  2901
Name:  ? Glyma.08G290100 Secondary Identifier:  ? PAC:30539126
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G290100 0.5kb upstream 0.5kb upstream 9265 true Chr08: 40317884-40327148 Glycine max
Glyma.08G290100 0.5kb upstream 0.5kb upstream 500 false Chr08: 40317884-40318383 Glycine max
Glyma.08G290100 0.5kb downstream 0.5kb downstream 9265 true Chr08: 40318384-40327648 Glycine max
Glyma.08G290100 0.5kb downstream 0.5kb downstream 500 false Chr08: 40327149-40327648 Glycine max
Glyma.08G290100 1.0kb upstream 1.0kb upstream 9765 true Chr08: 40317384-40327148 Glycine max
Glyma.08G290100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40317384-40318383 Glycine max
Glyma.08G290100 1.0kb downstream 1.0kb downstream 9765 true Chr08: 40318384-40328148 Glycine max
Glyma.08G290100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40327149-40328148 Glycine max
Glyma.08G290100 2.0kb upstream 2.0kb upstream 10765 true Chr08: 40316384-40327148 Glycine max
Glyma.08G290100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40316384-40318383 Glycine max
Glyma.08G290100 2.0kb downstream 2.0kb downstream 10765 true Chr08: 40318384-40329148 Glycine max
Glyma.08G290100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40327149-40329148 Glycine max
Glyma.08G290100 5.0kb upstream 5.0kb upstream 13765 true Chr08: 40313384-40327148 Glycine max
Glyma.08G290100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40313384-40318383 Glycine max
Glyma.08G290100 5.0kb downstream 5.0kb downstream 13765 true Chr08: 40318384-40332148 Glycine max
Glyma.08G290100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40327149-40332148 Glycine max
Glyma.08G290100 10.0kb upstream 10.0kb upstream 18765 true Chr08: 40308384-40327148 Glycine max
Glyma.08G290100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40308384-40318383 Glycine max
Glyma.08G290100 10.0kb downstream 10.0kb downstream 18765 true Chr08: 40318384-40337148 Glycine max
Glyma.08G290100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40327149-40337148 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311252 5265 Fabidae View MSA
124061901 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.76821 0.0 37.9461   High
cufflinks 3.97712 0.0 22.9703    
cufflinks 7.64076 0.0 36.5843   High
cufflinks 2.06649 0.0 15.5066   Low
cufflinks 3.31574 0.0 19.2572    
cufflinks 7.19436 0.0 36.7126    
cufflinks 2.76562 0.0 15.3431   Low
cufflinks 5.19364 0.0 27.2494    
cufflinks 4.83603 0.0 28.0471    
cufflinks 0.15        
cufflinks 0.374        
cufflinks 0.153        
cufflinks 0.15        
cufflinks 0.094       Low
cufflinks 0.643       High
cufflinks 0.347        
cufflinks 0.069       Low
cufflinks 0.121        
cufflinks 0.117       Low
cufflinks 0.292        
cufflinks 0.491       High
cufflinks 0.342        
cufflinks 0.229        
cufflinks 0.21        
cufflinks 0.262        
cufflinks 0.262        

0 Strain