Gene : Glyma.08G292000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11014//PTHR11014:SF85 - PEPTIDASE M20 FAMILY MEMBER Genomic Order:  2920
Name:  ? Glyma.08G292000 Secondary Identifier:  ? PAC:30537588
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G292000 0.5kb upstream 0.5kb upstream 4217 true Chr08: 40600418-40604634 Glycine max
Glyma.08G292000 0.5kb upstream 0.5kb upstream 500 false Chr08: 40604135-40604634 Glycine max
Glyma.08G292000 0.5kb downstream 0.5kb downstream 4217 true Chr08: 40599918-40604134 Glycine max
Glyma.08G292000 0.5kb downstream 0.5kb downstream 500 false Chr08: 40599918-40600417 Glycine max
Glyma.08G292000 1.0kb upstream 1.0kb upstream 4717 true Chr08: 40600418-40605134 Glycine max
Glyma.08G292000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40604135-40605134 Glycine max
Glyma.08G292000 1.0kb downstream 1.0kb downstream 4717 true Chr08: 40599418-40604134 Glycine max
Glyma.08G292000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40599418-40600417 Glycine max
Glyma.08G292000 2.0kb upstream 2.0kb upstream 5717 true Chr08: 40600418-40606134 Glycine max
Glyma.08G292000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40604135-40606134 Glycine max
Glyma.08G292000 2.0kb downstream 2.0kb downstream 5717 true Chr08: 40598418-40604134 Glycine max
Glyma.08G292000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40598418-40600417 Glycine max
Glyma.08G292000 5.0kb upstream 5.0kb upstream 8717 true Chr08: 40600418-40609134 Glycine max
Glyma.08G292000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40604135-40609134 Glycine max
Glyma.08G292000 5.0kb downstream 5.0kb downstream 8717 true Chr08: 40595418-40604134 Glycine max
Glyma.08G292000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40595418-40600417 Glycine max
Glyma.08G292000 10.0kb upstream 10.0kb upstream 13717 true Chr08: 40600418-40614134 Glycine max
Glyma.08G292000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40604135-40614134 Glycine max
Glyma.08G292000 10.0kb downstream 10.0kb downstream 13717 true Chr08: 40590418-40604134 Glycine max
Glyma.08G292000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40590418-40600417 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303487 5265 Fabidae View MSA
124050601 5270 Rosid View MSA
123745487 5271 Pentapetalae View MSA
122795050 5272 Eudicot View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88003 0.0 10.7169    
cufflinks 1.90573 0.0 10.837    
cufflinks 12.3056 0.0 47.091   High
cufflinks 2.29623 0.0 10.7291    
cufflinks 2.39149 0.0 12.767    
cufflinks 8.64345 0.0 35.2353   High
cufflinks 5.39089 0.0 24.4432    
cufflinks 1.02815 0.0 7.24471   Low
cufflinks 1.36855 0.0 11.0243    
cufflinks 1.534        
cufflinks 1.494        
cufflinks 1.389        
cufflinks 0.593        
cufflinks 0.21        
cufflinks 0.284        
cufflinks 0.143       Low
cufflinks 17.887     High High
cufflinks 0.58        
cufflinks 0.316        
cufflinks 0.177       Low
cufflinks 0.826        
cufflinks 0.149       Low
cufflinks 0.827        
cufflinks 2.562       High
cufflinks 0.162       Low
cufflinks 2.802       High

0 Strain