Gene : Glyma.08G281700 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  2817
Name:  ? Glyma.08G281700 Secondary Identifier:  ? PAC:30536806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G281700 0.5kb upstream 0.5kb upstream 4490 true Chr08: 38594812-38599301 Glycine max
Glyma.08G281700 0.5kb upstream 0.5kb upstream 500 false Chr08: 38594812-38595311 Glycine max
Glyma.08G281700 0.5kb downstream 0.5kb downstream 4490 true Chr08: 38595312-38599801 Glycine max
Glyma.08G281700 0.5kb downstream 0.5kb downstream 500 false Chr08: 38599302-38599801 Glycine max
Glyma.08G281700 1.0kb upstream 1.0kb upstream 4990 true Chr08: 38594312-38599301 Glycine max
Glyma.08G281700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 38594312-38595311 Glycine max
Glyma.08G281700 1.0kb downstream 1.0kb downstream 4990 true Chr08: 38595312-38600301 Glycine max
Glyma.08G281700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 38599302-38600301 Glycine max
Glyma.08G281700 2.0kb upstream 2.0kb upstream 5990 true Chr08: 38593312-38599301 Glycine max
Glyma.08G281700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 38593312-38595311 Glycine max
Glyma.08G281700 2.0kb downstream 2.0kb downstream 5990 true Chr08: 38595312-38601301 Glycine max
Glyma.08G281700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 38599302-38601301 Glycine max
Glyma.08G281700 5.0kb upstream 5.0kb upstream 8990 true Chr08: 38590312-38599301 Glycine max
Glyma.08G281700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 38590312-38595311 Glycine max
Glyma.08G281700 5.0kb downstream 5.0kb downstream 8990 true Chr08: 38595312-38604301 Glycine max
Glyma.08G281700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 38599302-38604301 Glycine max
Glyma.08G281700 10.0kb upstream 10.0kb upstream 13990 true Chr08: 38585312-38599301 Glycine max
Glyma.08G281700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 38585312-38595311 Glycine max
Glyma.08G281700 10.0kb downstream 10.0kb downstream 13990 true Chr08: 38595312-38609301 Glycine max
Glyma.08G281700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 38599302-38609301 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253644 5265 Fabidae View MSA
124063063 5270 Rosid View MSA
123741197 5271 Pentapetalae View MSA
122790545 5272 Eudicot View MSA
122042377 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.06681 0.0 3.56403    
cufflinks 1.71479 0.0 5.3559    
cufflinks 1.84014 0.0 5.66357    
cufflinks 4.19354 0.0 11.6853   High
cufflinks 1.79484 0.0 5.58887    
cufflinks 1.21175 0.0 3.98082    
cufflinks 0.484745 0.0 1.74285   Low
cufflinks 1.54571 0.0 4.89211    
cufflinks 0.980275 0.0 3.30443    
cufflinks 1.816        
cufflinks 0.363       Low
cufflinks 2.272        
cufflinks 2.777        
cufflinks 1.014        
cufflinks 0.052     Low Low
cufflinks 2.419        
cufflinks 0.273       Low
cufflinks 3.208        
cufflinks 2.115        
cufflinks 3.732        
cufflinks 0.63        
cufflinks 3.236        
cufflinks 3.871        
cufflinks 0.711        
cufflinks 4.073        
cufflinks 0.398        

0 Strain