Gene : Glyma.08G284300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  2843
Name:  ? Glyma.08G284300 Secondary Identifier:  ? PAC:30537643
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G284300 0.5kb upstream 0.5kb upstream 9402 true Chr08: 39223726-39233127 Glycine max
Glyma.08G284300 0.5kb upstream 0.5kb upstream 500 false Chr08: 39232628-39233127 Glycine max
Glyma.08G284300 0.5kb downstream 0.5kb downstream 9402 true Chr08: 39223226-39232627 Glycine max
Glyma.08G284300 0.5kb downstream 0.5kb downstream 500 false Chr08: 39223226-39223725 Glycine max
Glyma.08G284300 1.0kb upstream 1.0kb upstream 9902 true Chr08: 39223726-39233627 Glycine max
Glyma.08G284300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 39232628-39233627 Glycine max
Glyma.08G284300 1.0kb downstream 1.0kb downstream 9902 true Chr08: 39222726-39232627 Glycine max
Glyma.08G284300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 39222726-39223725 Glycine max
Glyma.08G284300 2.0kb upstream 2.0kb upstream 10902 true Chr08: 39223726-39234627 Glycine max
Glyma.08G284300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 39232628-39234627 Glycine max
Glyma.08G284300 2.0kb downstream 2.0kb downstream 10902 true Chr08: 39221726-39232627 Glycine max
Glyma.08G284300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 39221726-39223725 Glycine max
Glyma.08G284300 5.0kb upstream 5.0kb upstream 13902 true Chr08: 39223726-39237627 Glycine max
Glyma.08G284300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 39232628-39237627 Glycine max
Glyma.08G284300 5.0kb downstream 5.0kb downstream 13902 true Chr08: 39218726-39232627 Glycine max
Glyma.08G284300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 39218726-39223725 Glycine max
Glyma.08G284300 10.0kb upstream 10.0kb upstream 18902 true Chr08: 39223726-39242627 Glycine max
Glyma.08G284300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 39232628-39242627 Glycine max
Glyma.08G284300 10.0kb downstream 10.0kb downstream 18902 true Chr08: 39213726-39232627 Glycine max
Glyma.08G284300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 39213726-39223725 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310769 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.14186 0.0 12.6409    
cufflinks 1.46648 0.0 5.84012    
cufflinks 0.686555 0.0 3.12531    
cufflinks 3.117 0.0 9.88974    
cufflinks 0.596612 0.0 2.75104    
cufflinks 0.540481 0.0 2.12415    
cufflinks 8.5324 0.0 27.5674   High
cufflinks 0.301772 0.0 1.45838   Low
cufflinks 1.37       High
cufflinks 0.015     Low  
cufflinks 0.536       High
cufflinks 0.039     Low  
cufflinks 0.161        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.032     Low  
cufflinks 1.033       High
cufflinks 0.527       High
cufflinks 0.002     Low Low
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  

0 Strain