Gene : Glyma.08G285300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Genomic Order:  2853
Name:  ? Glyma.08G285300 Secondary Identifier:  ? PAC:30537925
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G285300 0.5kb upstream 0.5kb upstream 7886 true Chr08: 39461951-39469836 Glycine max
Glyma.08G285300 0.5kb upstream 0.5kb upstream 500 false Chr08: 39461951-39462450 Glycine max
Glyma.08G285300 0.5kb downstream 0.5kb downstream 7886 true Chr08: 39462451-39470336 Glycine max
Glyma.08G285300 0.5kb downstream 0.5kb downstream 500 false Chr08: 39469837-39470336 Glycine max
Glyma.08G285300 1.0kb upstream 1.0kb upstream 8386 true Chr08: 39461451-39469836 Glycine max
Glyma.08G285300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 39461451-39462450 Glycine max
Glyma.08G285300 1.0kb downstream 1.0kb downstream 8386 true Chr08: 39462451-39470836 Glycine max
Glyma.08G285300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 39469837-39470836 Glycine max
Glyma.08G285300 2.0kb upstream 2.0kb upstream 9386 true Chr08: 39460451-39469836 Glycine max
Glyma.08G285300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 39460451-39462450 Glycine max
Glyma.08G285300 2.0kb downstream 2.0kb downstream 9386 true Chr08: 39462451-39471836 Glycine max
Glyma.08G285300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 39469837-39471836 Glycine max
Glyma.08G285300 5.0kb upstream 5.0kb upstream 12386 true Chr08: 39457451-39469836 Glycine max
Glyma.08G285300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 39457451-39462450 Glycine max
Glyma.08G285300 5.0kb downstream 5.0kb downstream 12386 true Chr08: 39462451-39474836 Glycine max
Glyma.08G285300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 39469837-39474836 Glycine max
Glyma.08G285300 10.0kb upstream 10.0kb upstream 17386 true Chr08: 39452451-39469836 Glycine max
Glyma.08G285300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 39452451-39462450 Glycine max
Glyma.08G285300 10.0kb downstream 10.0kb downstream 17386 true Chr08: 39462451-39479836 Glycine max
Glyma.08G285300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 39469837-39479836 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309692 5265 Fabidae View MSA
124069340 5270 Rosid View MSA
123627867 5271 Pentapetalae View MSA
122795496 5272 Eudicot View MSA
122048202 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310882 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.9012 0.0 2.99484    
cufflinks 0.407838 0.0 1.46304    
cufflinks 0.351791 0.0 1.27154    
cufflinks 0.176666 0.0 0.66315 Low  
cufflinks 0.354589 0.0 1.28306    
cufflinks 0.1612 0.0 0.607493 Low  
cufflinks 0.120743 0.0 0.460971 Low Low
cufflinks 2.04205 0.0 6.05569   High
cufflinks 0.988278 0.0 3.24741    
cufflinks 0.597        
cufflinks 0.238        
cufflinks 0.195        
cufflinks 0.625        
cufflinks 0.168        
cufflinks 0.038     Low Low
cufflinks 0.36        
cufflinks 0.532        
cufflinks 0.693       High
cufflinks 0.276        
cufflinks 0.414        
cufflinks 0.383        
cufflinks 0.601        
cufflinks 0.32        
cufflinks 0.307        
cufflinks 0.467        
cufflinks 0.517        

0 Strain