Gene : Glyma.08G285700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12280//PTHR12280:SF26 - PANTOTHENATE KINASE Genomic Order:  2857
Name:  ? Glyma.08G285700 Secondary Identifier:  ? PAC:30535619
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PANTO-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G285700 0.5kb upstream 0.5kb upstream 8695 true Chr08: 39548936-39557630 Glycine max
Glyma.08G285700 0.5kb upstream 0.5kb upstream 500 false Chr08: 39548936-39549435 Glycine max
Glyma.08G285700 0.5kb downstream 0.5kb downstream 8695 true Chr08: 39549436-39558130 Glycine max
Glyma.08G285700 0.5kb downstream 0.5kb downstream 500 false Chr08: 39557631-39558130 Glycine max
Glyma.08G285700 1.0kb upstream 1.0kb upstream 9195 true Chr08: 39548436-39557630 Glycine max
Glyma.08G285700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 39548436-39549435 Glycine max
Glyma.08G285700 1.0kb downstream 1.0kb downstream 9195 true Chr08: 39549436-39558630 Glycine max
Glyma.08G285700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 39557631-39558630 Glycine max
Glyma.08G285700 2.0kb upstream 2.0kb upstream 10195 true Chr08: 39547436-39557630 Glycine max
Glyma.08G285700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 39547436-39549435 Glycine max
Glyma.08G285700 2.0kb downstream 2.0kb downstream 10195 true Chr08: 39549436-39559630 Glycine max
Glyma.08G285700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 39557631-39559630 Glycine max
Glyma.08G285700 5.0kb upstream 5.0kb upstream 13195 true Chr08: 39544436-39557630 Glycine max
Glyma.08G285700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 39544436-39549435 Glycine max
Glyma.08G285700 5.0kb downstream 5.0kb downstream 13195 true Chr08: 39549436-39562630 Glycine max
Glyma.08G285700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 39557631-39562630 Glycine max
Glyma.08G285700 10.0kb upstream 10.0kb upstream 18195 true Chr08: 39539436-39557630 Glycine max
Glyma.08G285700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 39539436-39549435 Glycine max
Glyma.08G285700 10.0kb downstream 10.0kb downstream 18195 true Chr08: 39549436-39567630 Glycine max
Glyma.08G285700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 39557631-39567630 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608649 5273 Angiosperm Singleton cluster - no MSA
122240543 5265 Fabidae Singleton cluster - no MSA
123985581 5270 Rosid Singleton cluster - no MSA
123560994 5271 Pentapetalae Singleton cluster - no MSA
122595788 5272 Eudicot Singleton cluster - no MSA
121349290 5274 Embryophyte View MSA
123381257 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.34723 0.0 25.279    
cufflinks 6.99328 0.0 23.6433    
cufflinks 31.505 0.0 114.402 High High
cufflinks 10.7101 0.0 38.6543    
cufflinks 7.33701 0.0 28.2096    
cufflinks 23.1667 0.0 80.9812 High High
cufflinks 5.89864 0.0 20.9708    
cufflinks 9.03021 0.0 33.4169    
cufflinks 8.55136 0.0 27.8241    
cufflinks 1.161        
cufflinks 1.141        
cufflinks 2.574       High
cufflinks 1.624        
cufflinks 1.312        
cufflinks 0.71       Low
cufflinks 0.932        
cufflinks 2.209       High
cufflinks 1.746        
cufflinks 1.28        
cufflinks 0.749       Low
cufflinks 1.018        
cufflinks 0.894        
cufflinks 1.481        
cufflinks 1.397        
cufflinks 0.811       Low
cufflinks 2.606       High

0 Strain