Gene : Glyma.08G330600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13301//PTHR13301:SF54 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  3306
Name:  ? Glyma.08G330600 Secondary Identifier:  ? PAC:30536190
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1001 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G330600 0.5kb upstream 0.5kb upstream 8535 true Chr08: 44828516-44837050 Glycine max
Glyma.08G330600 0.5kb upstream 0.5kb upstream 500 false Chr08: 44836551-44837050 Glycine max
Glyma.08G330600 0.5kb downstream 0.5kb downstream 8535 true Chr08: 44828016-44836550 Glycine max
Glyma.08G330600 0.5kb downstream 0.5kb downstream 500 false Chr08: 44828016-44828515 Glycine max
Glyma.08G330600 1.0kb upstream 1.0kb upstream 9035 true Chr08: 44828516-44837550 Glycine max
Glyma.08G330600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44836551-44837550 Glycine max
Glyma.08G330600 1.0kb downstream 1.0kb downstream 9035 true Chr08: 44827516-44836550 Glycine max
Glyma.08G330600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44827516-44828515 Glycine max
Glyma.08G330600 2.0kb upstream 2.0kb upstream 10035 true Chr08: 44828516-44838550 Glycine max
Glyma.08G330600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44836551-44838550 Glycine max
Glyma.08G330600 2.0kb downstream 2.0kb downstream 10035 true Chr08: 44826516-44836550 Glycine max
Glyma.08G330600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44826516-44828515 Glycine max
Glyma.08G330600 5.0kb upstream 5.0kb upstream 13035 true Chr08: 44828516-44841550 Glycine max
Glyma.08G330600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44836551-44841550 Glycine max
Glyma.08G330600 5.0kb downstream 5.0kb downstream 13035 true Chr08: 44823516-44836550 Glycine max
Glyma.08G330600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44823516-44828515 Glycine max
Glyma.08G330600 10.0kb upstream 10.0kb upstream 18035 true Chr08: 44828516-44846550 Glycine max
Glyma.08G330600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44836551-44846550 Glycine max
Glyma.08G330600 10.0kb downstream 10.0kb downstream 18035 true Chr08: 44818516-44836550 Glycine max
Glyma.08G330600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44818516-44828515 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315597 5265 Fabidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.1795 0.0 122.137 High  
cufflinks 4.97676 0.0 13.8349    
cufflinks 124.417 0.0 448.471 High High
cufflinks 1.65544 0.0 5.29414   Low
cufflinks 17.5902 0.0 47.2018    
cufflinks 18.9572 0.0 51.072    
cufflinks 0.412441 0.0 1.51037   Low
cufflinks 4.27603 0.0 12.0599    
cufflinks 66.1647 0.0 205.791 High  
cufflinks 1.341       Low
cufflinks 3.829        
cufflinks 22.286     High High
cufflinks 1.157       Low
cufflinks 0.333       Low
cufflinks 63.689     High High
cufflinks 9.178     High  
cufflinks 2.675        
cufflinks 3.711        
cufflinks 1.898        
cufflinks 18.888     High High
cufflinks 4.181        
cufflinks 12.146     High  
cufflinks 5.93        
cufflinks 5.555        
cufflinks 14.142     High  
cufflinks 2.55        

0 Strain