Gene : Glyma.08G330700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13301//PTHR13301:SF54 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  3307
Name:  ? Glyma.08G330700 Secondary Identifier:  ? PAC:30537915
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1001 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G330700 0.5kb upstream 0.5kb upstream 6150 true Chr08: 44841021-44847170 Glycine max
Glyma.08G330700 0.5kb upstream 0.5kb upstream 500 false Chr08: 44846671-44847170 Glycine max
Glyma.08G330700 0.5kb downstream 0.5kb downstream 6150 true Chr08: 44840521-44846670 Glycine max
Glyma.08G330700 0.5kb downstream 0.5kb downstream 500 false Chr08: 44840521-44841020 Glycine max
Glyma.08G330700 1.0kb upstream 1.0kb upstream 6650 true Chr08: 44841021-44847670 Glycine max
Glyma.08G330700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44846671-44847670 Glycine max
Glyma.08G330700 1.0kb downstream 1.0kb downstream 6650 true Chr08: 44840021-44846670 Glycine max
Glyma.08G330700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44840021-44841020 Glycine max
Glyma.08G330700 2.0kb upstream 2.0kb upstream 7650 true Chr08: 44841021-44848670 Glycine max
Glyma.08G330700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44846671-44848670 Glycine max
Glyma.08G330700 2.0kb downstream 2.0kb downstream 7650 true Chr08: 44839021-44846670 Glycine max
Glyma.08G330700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44839021-44841020 Glycine max
Glyma.08G330700 5.0kb upstream 5.0kb upstream 10650 true Chr08: 44841021-44851670 Glycine max
Glyma.08G330700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44846671-44851670 Glycine max
Glyma.08G330700 5.0kb downstream 5.0kb downstream 10650 true Chr08: 44836021-44846670 Glycine max
Glyma.08G330700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44836021-44841020 Glycine max
Glyma.08G330700 10.0kb upstream 10.0kb upstream 15650 true Chr08: 44841021-44856670 Glycine max
Glyma.08G330700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44846671-44856670 Glycine max
Glyma.08G330700 10.0kb downstream 10.0kb downstream 15650 true Chr08: 44831021-44846670 Glycine max
Glyma.08G330700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44831021-44841020 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299327 5265 Fabidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.35398 0.0 28.7834    
cufflinks 1.78379 0.0 7.64246    
cufflinks 2.92226 0.0 10.5531    
cufflinks 0.872271 0.0 4.62169    
cufflinks 5.56197 0.0 20.377    
cufflinks 73.4601 0.0 299.267 High High
cufflinks 0.39394 0.0 2.4478   Low
cufflinks 2.23434 0.0 8.93774    
cufflinks 14.748 0.0 49.5331    
cufflinks 2.423        
cufflinks 13.163     High High
cufflinks 0.202        
cufflinks 8.594     High  
cufflinks 0.748        
cufflinks 2.445        
cufflinks 0.111       Low
cufflinks 5.76        
cufflinks 0.103     Low Low
cufflinks 0.525        
cufflinks 0.081     Low Low
cufflinks 27.104     High High
cufflinks 0.132        
cufflinks 0.157        
cufflinks 26.92     High High
cufflinks 0.113       Low
cufflinks 14.476     High High

0 Strain