Gene : Glyma.08G331900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11800:SF13 - DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1 Genomic Order:  3319
Name:  ? Glyma.08G331900 Secondary Identifier:  ? PAC:30537841
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G331900 0.5kb upstream 0.5kb upstream 5272 true Chr08: 44929802-44935073 Glycine max
Glyma.08G331900 0.5kb upstream 0.5kb upstream 500 false Chr08: 44934574-44935073 Glycine max
Glyma.08G331900 0.5kb downstream 0.5kb downstream 5272 true Chr08: 44929302-44934573 Glycine max
Glyma.08G331900 0.5kb downstream 0.5kb downstream 500 false Chr08: 44929302-44929801 Glycine max
Glyma.08G331900 1.0kb upstream 1.0kb upstream 5772 true Chr08: 44929802-44935573 Glycine max
Glyma.08G331900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44934574-44935573 Glycine max
Glyma.08G331900 1.0kb downstream 1.0kb downstream 5772 true Chr08: 44928802-44934573 Glycine max
Glyma.08G331900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44928802-44929801 Glycine max
Glyma.08G331900 2.0kb upstream 2.0kb upstream 6772 true Chr08: 44929802-44936573 Glycine max
Glyma.08G331900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44934574-44936573 Glycine max
Glyma.08G331900 2.0kb downstream 2.0kb downstream 6772 true Chr08: 44927802-44934573 Glycine max
Glyma.08G331900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44927802-44929801 Glycine max
Glyma.08G331900 5.0kb upstream 5.0kb upstream 9772 true Chr08: 44929802-44939573 Glycine max
Glyma.08G331900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44934574-44939573 Glycine max
Glyma.08G331900 5.0kb downstream 5.0kb downstream 9772 true Chr08: 44924802-44934573 Glycine max
Glyma.08G331900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44924802-44929801 Glycine max
Glyma.08G331900 10.0kb upstream 10.0kb upstream 14772 true Chr08: 44929802-44944573 Glycine max
Glyma.08G331900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44934574-44944573 Glycine max
Glyma.08G331900 10.0kb downstream 10.0kb downstream 14772 true Chr08: 44919802-44934573 Glycine max
Glyma.08G331900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44919802-44929801 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302392 5265 Fabidae View MSA
124063723 5270 Rosid View MSA
123738682 5271 Pentapetalae View MSA
122789471 5272 Eudicot View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.08779 0.0 17.5134    
cufflinks 5.30431 0.0 15.4967    
cufflinks 3.83877 0.0 11.6889   Low
cufflinks 4.60221 0.0 13.6832    
cufflinks 6.70218 0.0 19.0742   High
cufflinks 4.06248 0.0 12.3314   Low
cufflinks 4.92057 0.0 14.5519    
cufflinks 4.82575 0.0 14.2557    
cufflinks 7.42846 0.0 20.8627   High
cufflinks 0.901        
cufflinks 0.63       Low
cufflinks 2.202       High
cufflinks 2.973       High
cufflinks 3.682       High
cufflinks 0.811        
cufflinks 0.872        
cufflinks 0.936        
cufflinks 1.81        
cufflinks 1.926        
cufflinks 0.595       Low
cufflinks 0.937        
cufflinks 0.83        
cufflinks 1.286        
cufflinks 0.576       Low
cufflinks 0.828        
cufflinks 1.188        

0 Strain